Hb_000188_050

Information

Type -
Description -
Location Contig188: 62485-66242
Sequence    

Annotation

kegg
ID vvi:100266594
description uridine nucleosidase 1
nr
ID XP_012066471.1
description PREDICTED: uridine nucleosidase 1 [Jatropha curcas]
swissprot
ID Q9SJM7
description Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2
trembl
ID A0A067LE21
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23665 PE=4 SV=1
Gene Ontology
ID GO:0008477
description uridine nucleosidase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000188_050 0.0 - - PREDICTED: uridine nucleosidase 1 [Jatropha curcas]
2 Hb_000365_100 0.1048538044 - - PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
3 Hb_139002_010 0.1107379505 - - alpha-(1,4)-fucosyltransferase, putative [Ricinus communis]
4 Hb_000787_060 0.1123986899 - - thioredoxin domain-containing protein, putative [Ricinus communis]
5 Hb_000903_010 0.1173407903 - - hypothetical protein JCGZ_23825 [Jatropha curcas]
6 Hb_000347_040 0.1174274019 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
7 Hb_002473_050 0.1176115963 - - catalytic, putative [Ricinus communis]
8 Hb_000139_260 0.1178989072 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
9 Hb_001512_040 0.1191342513 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
10 Hb_000101_080 0.1191912911 - - PREDICTED: protein CREG1 [Jatropha curcas]
11 Hb_000006_010 0.1206951863 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000175_630 0.1216983725 - - PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Jatropha curcas]
13 Hb_007821_020 0.1223564827 - - PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X2 [Jatropha curcas]
14 Hb_001002_060 0.1227570451 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
15 Hb_002942_210 0.1239111658 - - alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]
16 Hb_012262_040 0.125497369 - - PREDICTED: uncharacterized protein LOC105633697 [Jatropha curcas]
17 Hb_002837_040 0.1257566293 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
18 Hb_000003_170 0.1257754574 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
19 Hb_143766_020 0.1259976018 - - putative phospholipase A2 [Gossypium arboreum]
20 Hb_000261_210 0.1261896448 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]

Gene co-expression network

sample Hb_000188_050 Hb_000188_050 Hb_000365_100 Hb_000365_100 Hb_000188_050--Hb_000365_100 Hb_139002_010 Hb_139002_010 Hb_000188_050--Hb_139002_010 Hb_000787_060 Hb_000787_060 Hb_000188_050--Hb_000787_060 Hb_000903_010 Hb_000903_010 Hb_000188_050--Hb_000903_010 Hb_000347_040 Hb_000347_040 Hb_000188_050--Hb_000347_040 Hb_002473_050 Hb_002473_050 Hb_000188_050--Hb_002473_050 Hb_000136_140 Hb_000136_140 Hb_000365_100--Hb_000136_140 Hb_000365_100--Hb_000347_040 Hb_001604_120 Hb_001604_120 Hb_000365_100--Hb_001604_120 Hb_013726_080 Hb_013726_080 Hb_000365_100--Hb_013726_080 Hb_002498_140 Hb_002498_140 Hb_000365_100--Hb_002498_140 Hb_002942_210 Hb_002942_210 Hb_139002_010--Hb_002942_210 Hb_000139_260 Hb_000139_260 Hb_139002_010--Hb_000139_260 Hb_004912_030 Hb_004912_030 Hb_139002_010--Hb_004912_030 Hb_008921_010 Hb_008921_010 Hb_139002_010--Hb_008921_010 Hb_003436_020 Hb_003436_020 Hb_139002_010--Hb_003436_020 Hb_002014_040 Hb_002014_040 Hb_139002_010--Hb_002014_040 Hb_001002_060 Hb_001002_060 Hb_000787_060--Hb_001002_060 Hb_000163_090 Hb_000163_090 Hb_000787_060--Hb_000163_090 Hb_000787_060--Hb_000903_010 Hb_002749_080 Hb_002749_080 Hb_000787_060--Hb_002749_080 Hb_000007_390 Hb_000007_390 Hb_000787_060--Hb_000007_390 Hb_000184_070 Hb_000184_070 Hb_000787_060--Hb_000184_070 Hb_002837_040 Hb_002837_040 Hb_000903_010--Hb_002837_040 Hb_004064_040 Hb_004064_040 Hb_000903_010--Hb_004064_040 Hb_002871_140 Hb_002871_140 Hb_000903_010--Hb_002871_140 Hb_000903_010--Hb_002749_080 Hb_000903_010--Hb_001002_060 Hb_004096_240 Hb_004096_240 Hb_000347_040--Hb_004096_240 Hb_000120_210 Hb_000120_210 Hb_000347_040--Hb_000120_210 Hb_005895_010 Hb_005895_010 Hb_000347_040--Hb_005895_010 Hb_069662_010 Hb_069662_010 Hb_000347_040--Hb_069662_010 Hb_001876_040 Hb_001876_040 Hb_000347_040--Hb_001876_040 Hb_000261_210 Hb_000261_210 Hb_002473_050--Hb_000261_210 Hb_000054_040 Hb_000054_040 Hb_002473_050--Hb_000054_040 Hb_025668_010 Hb_025668_010 Hb_002473_050--Hb_025668_010 Hb_000101_080 Hb_000101_080 Hb_002473_050--Hb_000101_080 Hb_007982_030 Hb_007982_030 Hb_002473_050--Hb_007982_030 Hb_002351_030 Hb_002351_030 Hb_002473_050--Hb_002351_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.558437 0.484438 1.72149 1.24447 1.6311 0.853522
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.328709 0.723715 0.562059 0.710927 1.35163

CAGE analysis