Hb_000186_270

Information

Type -
Description -
Location Contig186: 325051-328496
Sequence    

Annotation

kegg
ID rcu:RCOM_0903320
description subtilase, putative (EC:3.4.21.25)
nr
ID KDP40114.1
description hypothetical protein JCGZ_02112 [Jatropha curcas]
swissprot
ID F4HYR6
description Subtilisin-like protease SBT2.4 OS=Arabidopsis thaliana GN=SBT2.4 PE=1 SV=1
trembl
ID A0A067L7P5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02112 PE=4 SV=1
Gene Ontology
ID GO:0005618
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_270 0.0 - - hypothetical protein JCGZ_02112 [Jatropha curcas]
2 Hb_002175_020 0.1925159006 - - PREDICTED: uncharacterized protein LOC105642125 isoform X2 [Jatropha curcas]
3 Hb_002837_050 0.194783144 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
4 Hb_158144_010 0.1986713795 - - -
5 Hb_002972_010 0.2028096688 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
6 Hb_001712_070 0.2081940699 - - PREDICTED: HD domain-containing protein 2 [Jatropha curcas]
7 Hb_001799_110 0.2090269795 - - PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
8 Hb_009486_210 0.2105213411 - - -
9 Hb_000950_070 0.2212650597 - - PREDICTED: uncharacterized protein LOC105645259 isoform X2 [Jatropha curcas]
10 Hb_001396_210 0.2221146059 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001114_160 0.2221943302 - - PREDICTED: beta carbonic anhydrase 5, chloroplastic [Jatropha curcas]
12 Hb_003673_040 0.2301702443 - - dynamin family protein [Populus trichocarpa]
13 Hb_123199_010 0.233117992 - - SRK protein [Brassica cretica]
14 Hb_002092_120 0.2355333901 - - PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Jatropha curcas]
15 Hb_002631_300 0.2362549642 - - PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas]
16 Hb_000152_210 0.2378797142 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001722_050 0.2388163703 - - calcium binding family protein [Populus trichocarpa]
18 Hb_003556_030 0.2417756596 - - PREDICTED: uncharacterized oxidoreductase C663.09c isoform X1 [Jatropha curcas]
19 Hb_000008_370 0.2420221799 - - PREDICTED: uncharacterized protein LOC105628095 [Jatropha curcas]
20 Hb_001804_080 0.2461402109 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]

Gene co-expression network

sample Hb_000186_270 Hb_000186_270 Hb_002175_020 Hb_002175_020 Hb_000186_270--Hb_002175_020 Hb_002837_050 Hb_002837_050 Hb_000186_270--Hb_002837_050 Hb_158144_010 Hb_158144_010 Hb_000186_270--Hb_158144_010 Hb_002972_010 Hb_002972_010 Hb_000186_270--Hb_002972_010 Hb_001712_070 Hb_001712_070 Hb_000186_270--Hb_001712_070 Hb_001799_110 Hb_001799_110 Hb_000186_270--Hb_001799_110 Hb_002194_050 Hb_002194_050 Hb_002175_020--Hb_002194_050 Hb_004129_090 Hb_004129_090 Hb_002175_020--Hb_004129_090 Hb_007451_040 Hb_007451_040 Hb_002175_020--Hb_007451_040 Hb_000260_430 Hb_000260_430 Hb_002175_020--Hb_000260_430 Hb_007263_010 Hb_007263_010 Hb_002175_020--Hb_007263_010 Hb_000808_110 Hb_000808_110 Hb_002175_020--Hb_000808_110 Hb_001396_210 Hb_001396_210 Hb_002837_050--Hb_001396_210 Hb_003050_260 Hb_003050_260 Hb_002837_050--Hb_003050_260 Hb_004117_190 Hb_004117_190 Hb_002837_050--Hb_004117_190 Hb_000684_120 Hb_000684_120 Hb_002837_050--Hb_000684_120 Hb_001195_640 Hb_001195_640 Hb_002837_050--Hb_001195_640 Hb_000950_070 Hb_000950_070 Hb_002837_050--Hb_000950_070 Hb_000422_030 Hb_000422_030 Hb_158144_010--Hb_000422_030 Hb_000975_220 Hb_000975_220 Hb_158144_010--Hb_000975_220 Hb_001269_640 Hb_001269_640 Hb_158144_010--Hb_001269_640 Hb_002284_150 Hb_002284_150 Hb_158144_010--Hb_002284_150 Hb_002092_120 Hb_002092_120 Hb_158144_010--Hb_002092_120 Hb_006570_150 Hb_006570_150 Hb_158144_010--Hb_006570_150 Hb_001056_030 Hb_001056_030 Hb_002972_010--Hb_001056_030 Hb_001114_160 Hb_001114_160 Hb_002972_010--Hb_001114_160 Hb_003556_030 Hb_003556_030 Hb_002972_010--Hb_003556_030 Hb_002972_010--Hb_001712_070 Hb_000390_090 Hb_000390_090 Hb_002972_010--Hb_000390_090 Hb_000413_060 Hb_000413_060 Hb_002972_010--Hb_000413_060 Hb_000185_050 Hb_000185_050 Hb_001712_070--Hb_000185_050 Hb_000690_190 Hb_000690_190 Hb_001712_070--Hb_000690_190 Hb_002307_180 Hb_002307_180 Hb_001712_070--Hb_002307_180 Hb_015299_030 Hb_015299_030 Hb_001712_070--Hb_015299_030 Hb_000215_090 Hb_000215_090 Hb_001712_070--Hb_000215_090 Hb_001712_070--Hb_000390_090 Hb_003362_080 Hb_003362_080 Hb_001799_110--Hb_003362_080 Hb_000959_310 Hb_000959_310 Hb_001799_110--Hb_000959_310 Hb_075265_010 Hb_075265_010 Hb_001799_110--Hb_075265_010 Hb_009976_010 Hb_009976_010 Hb_001799_110--Hb_009976_010 Hb_001449_010 Hb_001449_010 Hb_001799_110--Hb_001449_010 Hb_001799_110--Hb_158144_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0718514 0.0251118 0.122451 0.0623297 0.0147603 0.013814
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0345859 0.136077 0 0.0216115 0.0289376

CAGE analysis