Hb_000049_090

Information

Type -
Description -
Location Contig49: 59633-64512
Sequence    

Annotation

kegg
ID rcu:RCOM_0542040
description hypothetical protein
nr
ID XP_012085219.1
description PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
swissprot
ID F4KFT7
description Probable aminopyrimidine aminohydrolase, mitochondrial OS=Arabidopsis thaliana GN=TNEA_C PE=2 SV=1
trembl
ID A0A067K3R9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17617 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45249: 63450-63587 , PASA_asmbl_45250: 62034-63700
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000049_090 0.0 - - PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
2 Hb_003071_020 0.13557544 transcription factor TF Family: ARF Auxin response factor [Medicago truncatula]
3 Hb_001288_070 0.1445233131 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
4 Hb_006738_050 0.1527129541 - - PREDICTED: uncharacterized protein LOC105634992 [Jatropha curcas]
5 Hb_000574_420 0.1551829462 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
6 Hb_000856_180 0.1554531502 - - calcium-dependent protein kinase [Hevea brasiliensis]
7 Hb_000062_080 0.1560390535 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
8 Hb_003060_090 0.1568452298 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
9 Hb_008066_070 0.1575129715 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
10 Hb_002026_060 0.1576657902 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
11 Hb_002046_020 0.1604013622 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
12 Hb_005496_180 0.164445654 - - PREDICTED: U-box domain-containing protein 4-like [Jatropha curcas]
13 Hb_127599_010 0.1667342746 - - hypothetical protein CISIN_1g0010462mg, partial [Citrus sinensis]
14 Hb_001104_170 0.1676229946 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-2c [Jatropha curcas]
15 Hb_004032_040 0.1683104679 - - unknown [Medicago truncatula]
16 Hb_005389_160 0.1695154026 - - PREDICTED: casein kinase I [Jatropha curcas]
17 Hb_011930_070 0.170242705 - - PREDICTED: probable AMP deaminase [Jatropha curcas]
18 Hb_000802_190 0.1703186206 - - PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase [Jatropha curcas]
19 Hb_001251_060 0.1706979956 - - aldo/keto reductase AKR [Manihot esculenta]
20 Hb_000205_240 0.1716259446 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000049_090 Hb_000049_090 Hb_003071_020 Hb_003071_020 Hb_000049_090--Hb_003071_020 Hb_001288_070 Hb_001288_070 Hb_000049_090--Hb_001288_070 Hb_006738_050 Hb_006738_050 Hb_000049_090--Hb_006738_050 Hb_000574_420 Hb_000574_420 Hb_000049_090--Hb_000574_420 Hb_000856_180 Hb_000856_180 Hb_000049_090--Hb_000856_180 Hb_000062_080 Hb_000062_080 Hb_000049_090--Hb_000062_080 Hb_003071_020--Hb_000856_180 Hb_006922_010 Hb_006922_010 Hb_003071_020--Hb_006922_010 Hb_000236_410 Hb_000236_410 Hb_003071_020--Hb_000236_410 Hb_002046_020 Hb_002046_020 Hb_003071_020--Hb_002046_020 Hb_001019_180 Hb_001019_180 Hb_003071_020--Hb_001019_180 Hb_001840_090 Hb_001840_090 Hb_003071_020--Hb_001840_090 Hb_000116_210 Hb_000116_210 Hb_001288_070--Hb_000116_210 Hb_000120_160 Hb_000120_160 Hb_001288_070--Hb_000120_160 Hb_008511_100 Hb_008511_100 Hb_001288_070--Hb_008511_100 Hb_000805_230 Hb_000805_230 Hb_001288_070--Hb_000805_230 Hb_000866_090 Hb_000866_090 Hb_001288_070--Hb_000866_090 Hb_002915_070 Hb_002915_070 Hb_001288_070--Hb_002915_070 Hb_000700_060 Hb_000700_060 Hb_006738_050--Hb_000700_060 Hb_002119_090 Hb_002119_090 Hb_006738_050--Hb_002119_090 Hb_004410_070 Hb_004410_070 Hb_006738_050--Hb_004410_070 Hb_000205_240 Hb_000205_240 Hb_006738_050--Hb_000205_240 Hb_007017_070 Hb_007017_070 Hb_006738_050--Hb_007017_070 Hb_004899_040 Hb_004899_040 Hb_006738_050--Hb_004899_040 Hb_011161_020 Hb_011161_020 Hb_000574_420--Hb_011161_020 Hb_006185_060 Hb_006185_060 Hb_000574_420--Hb_006185_060 Hb_004032_040 Hb_004032_040 Hb_000574_420--Hb_004032_040 Hb_012368_100 Hb_012368_100 Hb_000574_420--Hb_012368_100 Hb_000347_120 Hb_000347_120 Hb_000574_420--Hb_000347_120 Hb_000941_030 Hb_000941_030 Hb_000574_420--Hb_000941_030 Hb_032808_030 Hb_032808_030 Hb_000856_180--Hb_032808_030 Hb_000856_180--Hb_002046_020 Hb_000905_170 Hb_000905_170 Hb_000856_180--Hb_000905_170 Hb_000856_180--Hb_000236_410 Hb_000009_330 Hb_000009_330 Hb_000856_180--Hb_000009_330 Hb_001865_060 Hb_001865_060 Hb_000062_080--Hb_001865_060 Hb_127599_010 Hb_127599_010 Hb_000062_080--Hb_127599_010 Hb_000448_060 Hb_000448_060 Hb_000062_080--Hb_000448_060 Hb_000802_190 Hb_000802_190 Hb_000062_080--Hb_000802_190 Hb_000010_350 Hb_000010_350 Hb_000062_080--Hb_000010_350 Hb_001141_360 Hb_001141_360 Hb_000062_080--Hb_001141_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.92206 37.366 9.44336 9.98076 4.96957 9.55641
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.34879 4.51551 15.9941 18.0569 4.02907

CAGE analysis