Hb_182750_010

Information

Type -
Description -
Location Contig182750: 232-3288
Sequence    

Annotation

kegg
ID cic:CICLE_v10007325mg
description hypothetical protein
nr
ID EYU20922.1
description hypothetical protein MIMGU_mgv1a0001602mg, partial [Erythranthe guttata]
swissprot
ID F4K5J1
description Myosin-17 OS=Arabidopsis thaliana GN=XI-K PE=1 SV=2
trembl
ID A0A022PX29
description Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0001602mg PE=4 SV=1
Gene Ontology
ID GO:0016459
description myosin-17-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182750_010 0.0 - - hypothetical protein MIMGU_mgv1a0001602mg, partial [Erythranthe guttata]
2 Hb_009393_060 0.2062932686 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
3 Hb_002760_040 0.2317221188 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
4 Hb_000179_230 0.2336266473 - - PREDICTED: myosin-17 [Jatropha curcas]
5 Hb_001248_110 0.2361089244 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
6 Hb_003086_050 0.2395786299 - - calcium-dependent protein kinase, putative [Ricinus communis]
7 Hb_031295_010 0.2428853127 - - hypothetical protein JCGZ_19530 [Jatropha curcas]
8 Hb_003038_010 0.2475400507 - - ubiquitin-protein ligase, putative [Ricinus communis]
9 Hb_000700_100 0.2534375354 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
10 Hb_015978_030 0.2547747439 - - Zinc finger protein GIS2 [Medicago truncatula]
11 Hb_002686_400 0.2563642848 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
12 Hb_006414_020 0.2579222905 transcription factor TF Family: MYB -
13 Hb_000856_410 0.2599788077 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_000566_190 0.2602077079 - - unnamed protein product [Vitis vinifera]
15 Hb_009897_020 0.2648971187 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
16 Hb_075449_030 0.2651055025 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
17 Hb_126103_010 0.2699899797 - - Phosphoprotein phosphatase [Theobroma cacao]
18 Hb_007007_070 0.2715891461 transcription factor TF Family: TCP hypothetical protein MIMGU_mgv1a022855mg, partial [Erythranthe guttata]
19 Hb_002915_070 0.2720933461 - - PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Jatropha curcas]
20 Hb_001504_270 0.2749153104 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_182750_010 Hb_182750_010 Hb_009393_060 Hb_009393_060 Hb_182750_010--Hb_009393_060 Hb_002760_040 Hb_002760_040 Hb_182750_010--Hb_002760_040 Hb_000179_230 Hb_000179_230 Hb_182750_010--Hb_000179_230 Hb_001248_110 Hb_001248_110 Hb_182750_010--Hb_001248_110 Hb_003086_050 Hb_003086_050 Hb_182750_010--Hb_003086_050 Hb_031295_010 Hb_031295_010 Hb_182750_010--Hb_031295_010 Hb_003097_090 Hb_003097_090 Hb_009393_060--Hb_003097_090 Hb_007429_020 Hb_007429_020 Hb_009393_060--Hb_007429_020 Hb_000566_190 Hb_000566_190 Hb_009393_060--Hb_000566_190 Hb_006414_020 Hb_006414_020 Hb_009393_060--Hb_006414_020 Hb_008380_010 Hb_008380_010 Hb_009393_060--Hb_008380_010 Hb_009897_020 Hb_009897_020 Hb_002760_040--Hb_009897_020 Hb_005656_140 Hb_005656_140 Hb_002760_040--Hb_005656_140 Hb_003494_060 Hb_003494_060 Hb_002760_040--Hb_003494_060 Hb_002686_400 Hb_002686_400 Hb_002760_040--Hb_002686_400 Hb_117895_010 Hb_117895_010 Hb_002760_040--Hb_117895_010 Hb_003155_020 Hb_003155_020 Hb_002760_040--Hb_003155_020 Hb_002915_070 Hb_002915_070 Hb_000179_230--Hb_002915_070 Hb_000805_230 Hb_000805_230 Hb_000179_230--Hb_000805_230 Hb_004994_300 Hb_004994_300 Hb_000179_230--Hb_004994_300 Hb_000417_420 Hb_000417_420 Hb_000179_230--Hb_000417_420 Hb_103788_010 Hb_103788_010 Hb_000179_230--Hb_103788_010 Hb_000460_060 Hb_000460_060 Hb_000179_230--Hb_000460_060 Hb_004466_070 Hb_004466_070 Hb_001248_110--Hb_004466_070 Hb_000544_020 Hb_000544_020 Hb_001248_110--Hb_000544_020 Hb_001248_110--Hb_000566_190 Hb_001608_030 Hb_001608_030 Hb_001248_110--Hb_001608_030 Hb_042553_010 Hb_042553_010 Hb_001248_110--Hb_042553_010 Hb_158696_010 Hb_158696_010 Hb_001248_110--Hb_158696_010 Hb_000307_110 Hb_000307_110 Hb_003086_050--Hb_000307_110 Hb_013057_030 Hb_013057_030 Hb_003086_050--Hb_013057_030 Hb_015978_030 Hb_015978_030 Hb_003086_050--Hb_015978_030 Hb_116349_050 Hb_116349_050 Hb_003086_050--Hb_116349_050 Hb_048653_020 Hb_048653_020 Hb_003086_050--Hb_048653_020 Hb_000103_400 Hb_000103_400 Hb_003086_050--Hb_000103_400 Hb_000152_860 Hb_000152_860 Hb_031295_010--Hb_000152_860 Hb_001472_130 Hb_001472_130 Hb_031295_010--Hb_001472_130 Hb_031295_010--Hb_006414_020 Hb_000809_080 Hb_000809_080 Hb_031295_010--Hb_000809_080 Hb_000856_410 Hb_000856_410 Hb_031295_010--Hb_000856_410 Hb_031295_010--Hb_000103_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.22164 0.189437 0.363494 0.0891394 0.558269
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0712689 0.0560354 0.706793 0.295285 0.448046

CAGE analysis