Hb_007429_020

Information

Type -
Description -
Location Contig7429: 35020-37116
Sequence    

Annotation

kegg
ID rcu:RCOM_1174200
description kinase, putative (EC:2.7.10.1)
nr
ID XP_002517905.1
description kinase, putative [Ricinus communis]
swissprot
ID O49445
description Probable L-type lectin-domain containing receptor kinase VII.2 OS=Arabidopsis thaliana GN=LECRK72 PE=3 SV=2
trembl
ID B9RVY6
description Kinase, putative OS=Ricinus communis GN=RCOM_1174200 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56563: 35703-36161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007429_020 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000181_080 0.1287701825 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
3 Hb_000003_420 0.1425970309 - - o-methyltransferase, putative [Ricinus communis]
4 Hb_008380_010 0.1465112428 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
5 Hb_000359_080 0.1509564531 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
6 Hb_029866_050 0.151879964 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
7 Hb_004531_010 0.1523643398 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]
8 Hb_029238_020 0.1572816833 - - PREDICTED: expansin-like A1 [Jatropha curcas]
9 Hb_000103_400 0.1597987591 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
10 Hb_000245_270 0.1610775547 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
11 Hb_052113_020 0.1663920156 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
12 Hb_116349_090 0.1669331688 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
13 Hb_000805_150 0.1717237667 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
14 Hb_012702_010 0.1743673611 - - PREDICTED: TMV resistance protein N-like isoform X4 [Vitis vinifera]
15 Hb_000397_090 0.1752596973 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
16 Hb_004122_020 0.1766907878 transcription factor TF Family: ERF ERF/AP2 domain-containing transcription factor [Manihot esculenta]
17 Hb_000172_080 0.1777146071 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
18 Hb_000000_070 0.1779255054 - - allene oxide synthase [Hevea brasiliensis]
19 Hb_000363_110 0.1779974404 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 21 [Jatropha curcas]
20 Hb_082870_010 0.1795789384 - - Disease resistance protein RFL1, putative [Ricinus communis]

Gene co-expression network

sample Hb_007429_020 Hb_007429_020 Hb_000181_080 Hb_000181_080 Hb_007429_020--Hb_000181_080 Hb_000003_420 Hb_000003_420 Hb_007429_020--Hb_000003_420 Hb_008380_010 Hb_008380_010 Hb_007429_020--Hb_008380_010 Hb_000359_080 Hb_000359_080 Hb_007429_020--Hb_000359_080 Hb_029866_050 Hb_029866_050 Hb_007429_020--Hb_029866_050 Hb_004531_010 Hb_004531_010 Hb_007429_020--Hb_004531_010 Hb_000307_110 Hb_000307_110 Hb_000181_080--Hb_000307_110 Hb_000181_080--Hb_004531_010 Hb_000103_400 Hb_000103_400 Hb_000181_080--Hb_000103_400 Hb_000245_270 Hb_000245_270 Hb_000181_080--Hb_000245_270 Hb_000210_150 Hb_000210_150 Hb_000181_080--Hb_000210_150 Hb_000397_090 Hb_000397_090 Hb_000003_420--Hb_000397_090 Hb_000473_080 Hb_000473_080 Hb_000003_420--Hb_000473_080 Hb_000003_420--Hb_029866_050 Hb_073119_010 Hb_073119_010 Hb_000003_420--Hb_073119_010 Hb_006698_020 Hb_006698_020 Hb_000003_420--Hb_006698_020 Hb_000363_110 Hb_000363_110 Hb_000003_420--Hb_000363_110 Hb_098160_010 Hb_098160_010 Hb_008380_010--Hb_098160_010 Hb_006414_020 Hb_006414_020 Hb_008380_010--Hb_006414_020 Hb_001898_010 Hb_001898_010 Hb_008380_010--Hb_001898_010 Hb_008380_010--Hb_000103_400 Hb_033149_020 Hb_033149_020 Hb_008380_010--Hb_033149_020 Hb_181824_010 Hb_181824_010 Hb_008380_010--Hb_181824_010 Hb_000172_080 Hb_000172_080 Hb_000359_080--Hb_000172_080 Hb_000359_080--Hb_000473_080 Hb_000359_080--Hb_029866_050 Hb_000359_080--Hb_000003_420 Hb_000359_080--Hb_000103_400 Hb_000359_080--Hb_000363_110 Hb_029866_050--Hb_006698_020 Hb_000649_160 Hb_000649_160 Hb_029866_050--Hb_000649_160 Hb_001568_120 Hb_001568_120 Hb_029866_050--Hb_001568_120 Hb_029866_050--Hb_000473_080 Hb_000347_370 Hb_000347_370 Hb_004531_010--Hb_000347_370 Hb_004267_070 Hb_004267_070 Hb_004531_010--Hb_004267_070 Hb_007305_040 Hb_007305_040 Hb_004531_010--Hb_007305_040 Hb_007383_050 Hb_007383_050 Hb_004531_010--Hb_007383_050 Hb_001411_150 Hb_001411_150 Hb_004531_010--Hb_001411_150 Hb_004531_010--Hb_000210_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.175002 8.56205 1.29403 2.37903 0.00924532 0.0708405
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0224439 0 0.569373 0.927353 0.559897

CAGE analysis