Hb_000103_400

Information

Type -
Description -
Location Contig103: 340340-344586
Sequence    

Annotation

kegg
ID rcu:RCOM_0910820
description sulfate adenylyltransferase, putative (EC:2.7.7.4)
nr
ID XP_012069724.1
description PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
swissprot
ID Q9LIK9
description ATP sulfurylase 1, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=1 SV=1
trembl
ID A0A067KZ82
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02241 PE=4 SV=1
Gene Ontology
ID GO:0009507
description atp sulfurylase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01239: 338792-344467
cDNA
(Sanger)
(ID:Location)		 013_M19.ab1: 340111-340316

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_400 0.0 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
2 Hb_002272_140 0.1136826283 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
3 Hb_000181_080 0.1167862878 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
4 Hb_000473_080 0.119713985 - - PREDICTED: lipase-like PAD4 [Populus euphratica]
5 Hb_006414_020 0.1203359914 transcription factor TF Family: MYB -
6 Hb_000359_080 0.1228004351 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
7 Hb_000803_060 0.1311990702 - - poly(p)/ATP NAD kinase, putative [Ricinus communis]
8 Hb_000434_050 0.1331577274 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
9 Hb_000220_090 0.1338563425 - - PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Jatropha curcas]
10 Hb_000003_420 0.1383851675 - - o-methyltransferase, putative [Ricinus communis]
11 Hb_078901_010 0.1394160012 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
12 Hb_000172_080 0.139815375 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
13 Hb_008380_010 0.1399377381 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
14 Hb_004787_100 0.1407595533 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
15 Hb_000532_030 0.1420419509 - - PREDICTED: oxalate--CoA ligase-like [Jatropha curcas]
16 Hb_001504_270 0.1423934801 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
17 Hb_000221_060 0.1451554031 - - -
18 Hb_000307_110 0.1455625754 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
19 Hb_138628_010 0.1491331775 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
20 Hb_005568_060 0.1493450676 - - PREDICTED: mitogen-activated protein kinase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_000103_400 Hb_000103_400 Hb_002272_140 Hb_002272_140 Hb_000103_400--Hb_002272_140 Hb_000181_080 Hb_000181_080 Hb_000103_400--Hb_000181_080 Hb_000473_080 Hb_000473_080 Hb_000103_400--Hb_000473_080 Hb_006414_020 Hb_006414_020 Hb_000103_400--Hb_006414_020 Hb_000359_080 Hb_000359_080 Hb_000103_400--Hb_000359_080 Hb_000803_060 Hb_000803_060 Hb_000103_400--Hb_000803_060 Hb_012702_010 Hb_012702_010 Hb_002272_140--Hb_012702_010 Hb_138628_010 Hb_138628_010 Hb_002272_140--Hb_138628_010 Hb_019961_010 Hb_019961_010 Hb_002272_140--Hb_019961_010 Hb_002284_020 Hb_002284_020 Hb_002272_140--Hb_002284_020 Hb_002272_140--Hb_000473_080 Hb_000307_110 Hb_000307_110 Hb_000181_080--Hb_000307_110 Hb_004531_010 Hb_004531_010 Hb_000181_080--Hb_004531_010 Hb_000245_270 Hb_000245_270 Hb_000181_080--Hb_000245_270 Hb_000210_150 Hb_000210_150 Hb_000181_080--Hb_000210_150 Hb_007429_020 Hb_007429_020 Hb_000181_080--Hb_007429_020 Hb_000473_080--Hb_000359_080 Hb_000003_420 Hb_000003_420 Hb_000473_080--Hb_000003_420 Hb_000752_020 Hb_000752_020 Hb_000473_080--Hb_000752_020 Hb_073119_010 Hb_073119_010 Hb_000473_080--Hb_073119_010 Hb_006414_020--Hb_000803_060 Hb_001489_120 Hb_001489_120 Hb_006414_020--Hb_001489_120 Hb_012787_040 Hb_012787_040 Hb_006414_020--Hb_012787_040 Hb_011360_090 Hb_011360_090 Hb_006414_020--Hb_011360_090 Hb_001258_150 Hb_001258_150 Hb_006414_020--Hb_001258_150 Hb_000172_080 Hb_000172_080 Hb_000359_080--Hb_000172_080 Hb_029866_050 Hb_029866_050 Hb_000359_080--Hb_029866_050 Hb_000359_080--Hb_000003_420 Hb_000363_110 Hb_000363_110 Hb_000359_080--Hb_000363_110 Hb_000803_060--Hb_012787_040 Hb_000803_060--Hb_001258_150 Hb_000803_060--Hb_001489_120 Hb_003752_120 Hb_003752_120 Hb_000803_060--Hb_003752_120 Hb_004032_310 Hb_004032_310 Hb_000803_060--Hb_004032_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.63302 198.118 36.1076 33.3946 3.77353 3.41901
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.06191 5.56045 8.30189 20.0925 11.1978

CAGE analysis