Hb_002284_020

Information

Type -
Description -
Location Contig2284: 31716-34844
Sequence    

Annotation

kegg
ID rcu:RCOM_1601990
description inorganic phosphate transporter, putative
nr
ID XP_012073588.1
description PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
swissprot
ID Q9S735
description Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1
trembl
ID A0A067KY54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08040 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inorganic phosphate transporter 1-9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23790: 31771-34875 , PASA_asmbl_23791: 31776-32715
cDNA
(Sanger)
(ID:Location)		 047_J16.ab1: 31776-32513

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002284_020 0.0 - - PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
2 Hb_002272_140 0.122010899 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
3 Hb_000473_080 0.1272529998 - - PREDICTED: lipase-like PAD4 [Populus euphratica]
4 Hb_000322_120 0.1275318821 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
5 Hb_174380_010 0.1279687441 - - kinase, putative [Ricinus communis]
6 Hb_000003_420 0.1306591328 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_021596_070 0.1321336189 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
8 Hb_000297_100 0.1324709525 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
9 Hb_000181_080 0.1325162629 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
10 Hb_007433_020 0.1325576038 - - hypothetical protein VITISV_005320 [Vitis vinifera]
11 Hb_041290_030 0.1332934016 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
12 Hb_029866_050 0.1347388755 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
13 Hb_000307_110 0.1349797571 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
14 Hb_000359_080 0.1416032652 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
15 Hb_009083_010 0.1442417683 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
16 Hb_000172_300 0.1451938156 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
17 Hb_001568_060 0.1454811402 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
18 Hb_008667_020 0.1460951969 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
19 Hb_004459_110 0.1472877332 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
20 Hb_005882_020 0.1479746056 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_002284_020 Hb_002284_020 Hb_002272_140 Hb_002272_140 Hb_002284_020--Hb_002272_140 Hb_000473_080 Hb_000473_080 Hb_002284_020--Hb_000473_080 Hb_000322_120 Hb_000322_120 Hb_002284_020--Hb_000322_120 Hb_174380_010 Hb_174380_010 Hb_002284_020--Hb_174380_010 Hb_000003_420 Hb_000003_420 Hb_002284_020--Hb_000003_420 Hb_021596_070 Hb_021596_070 Hb_002284_020--Hb_021596_070 Hb_012702_010 Hb_012702_010 Hb_002272_140--Hb_012702_010 Hb_000103_400 Hb_000103_400 Hb_002272_140--Hb_000103_400 Hb_138628_010 Hb_138628_010 Hb_002272_140--Hb_138628_010 Hb_019961_010 Hb_019961_010 Hb_002272_140--Hb_019961_010 Hb_002272_140--Hb_000473_080 Hb_000359_080 Hb_000359_080 Hb_000473_080--Hb_000359_080 Hb_000473_080--Hb_000003_420 Hb_000752_020 Hb_000752_020 Hb_000473_080--Hb_000752_020 Hb_073119_010 Hb_073119_010 Hb_000473_080--Hb_073119_010 Hb_000473_080--Hb_000103_400 Hb_005882_020 Hb_005882_020 Hb_000322_120--Hb_005882_020 Hb_002660_090 Hb_002660_090 Hb_000322_120--Hb_002660_090 Hb_000086_610 Hb_000086_610 Hb_000322_120--Hb_000086_610 Hb_001289_030 Hb_001289_030 Hb_000322_120--Hb_001289_030 Hb_002205_260 Hb_002205_260 Hb_000322_120--Hb_002205_260 Hb_009083_010 Hb_009083_010 Hb_174380_010--Hb_009083_010 Hb_006634_080 Hb_006634_080 Hb_174380_010--Hb_006634_080 Hb_117127_010 Hb_117127_010 Hb_174380_010--Hb_117127_010 Hb_000338_030 Hb_000338_030 Hb_174380_010--Hb_000338_030 Hb_000133_060 Hb_000133_060 Hb_174380_010--Hb_000133_060 Hb_012545_080 Hb_012545_080 Hb_174380_010--Hb_012545_080 Hb_000397_090 Hb_000397_090 Hb_000003_420--Hb_000397_090 Hb_029866_050 Hb_029866_050 Hb_000003_420--Hb_029866_050 Hb_000003_420--Hb_073119_010 Hb_006698_020 Hb_006698_020 Hb_000003_420--Hb_006698_020 Hb_000363_110 Hb_000363_110 Hb_000003_420--Hb_000363_110 Hb_008667_020 Hb_008667_020 Hb_021596_070--Hb_008667_020 Hb_007433_020 Hb_007433_020 Hb_021596_070--Hb_007433_020 Hb_010962_030 Hb_010962_030 Hb_021596_070--Hb_010962_030 Hb_011054_030 Hb_011054_030 Hb_021596_070--Hb_011054_030 Hb_007371_020 Hb_007371_020 Hb_021596_070--Hb_007371_020 Hb_111985_060 Hb_111985_060 Hb_021596_070--Hb_111985_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0382164 31.531 5.0572 4.17093 0 0.0486418
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.233453 1.01027 0.487248 4.67107 1.70649

CAGE analysis