Hb_013057_030

Information

Type -
Description -
Location Contig13057: 26156-26572
Sequence    

Annotation

kegg
ID rcu:RCOM_0095480
description hypothetical protein
nr
ID XP_002533493.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T5H4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0095480 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_013057_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002217_440 0.1104496131 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
3 Hb_048653_040 0.1272171245 - - ankyrin repeat family protein [Populus trichocarpa]
4 Hb_048653_020 0.136645427 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_000172_300 0.1399112437 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
6 Hb_116349_050 0.1523139131 - - formin homology 2 domain-containing family protein [Populus trichocarpa]
7 Hb_003086_050 0.1529024432 - - calcium-dependent protein kinase, putative [Ricinus communis]
8 Hb_174829_040 0.1607074763 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
9 Hb_001514_040 0.1618320221 - - l-asparaginase, putative [Ricinus communis]
10 Hb_002760_060 0.1627112745 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
11 Hb_004324_290 0.1635446504 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
12 Hb_000039_100 0.1670253973 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
13 Hb_003442_050 0.1686482287 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
14 Hb_000574_120 0.1706629101 - - conserved hypothetical protein [Ricinus communis]
15 Hb_015978_030 0.1713541255 - - Zinc finger protein GIS2 [Medicago truncatula]
16 Hb_002272_140 0.1797964739 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
17 Hb_000142_010 0.1811406708 - - PREDICTED: uncharacterized protein LOC105632779 [Jatropha curcas]
18 Hb_003053_060 0.1815818552 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
19 Hb_000627_140 0.1816150694 - - ATP binding protein, putative [Ricinus communis]
20 Hb_055706_010 0.1840101038 - - hypothetical protein JCGZ_22222 [Jatropha curcas]

Gene co-expression network

sample Hb_013057_030 Hb_013057_030 Hb_002217_440 Hb_002217_440 Hb_013057_030--Hb_002217_440 Hb_048653_040 Hb_048653_040 Hb_013057_030--Hb_048653_040 Hb_048653_020 Hb_048653_020 Hb_013057_030--Hb_048653_020 Hb_000172_300 Hb_000172_300 Hb_013057_030--Hb_000172_300 Hb_116349_050 Hb_116349_050 Hb_013057_030--Hb_116349_050 Hb_003086_050 Hb_003086_050 Hb_013057_030--Hb_003086_050 Hb_001810_010 Hb_001810_010 Hb_002217_440--Hb_001810_010 Hb_002217_440--Hb_048653_020 Hb_000417_290 Hb_000417_290 Hb_002217_440--Hb_000417_290 Hb_008616_060 Hb_008616_060 Hb_002217_440--Hb_008616_060 Hb_002217_440--Hb_048653_040 Hb_048653_040--Hb_000172_300 Hb_000039_100 Hb_000039_100 Hb_048653_040--Hb_000039_100 Hb_011054_030 Hb_011054_030 Hb_048653_040--Hb_011054_030 Hb_001437_200 Hb_001437_200 Hb_048653_040--Hb_001437_200 Hb_055706_010 Hb_055706_010 Hb_048653_040--Hb_055706_010 Hb_048653_040--Hb_116349_050 Hb_002918_150 Hb_002918_150 Hb_048653_020--Hb_002918_150 Hb_138575_010 Hb_138575_010 Hb_048653_020--Hb_138575_010 Hb_048653_020--Hb_003086_050 Hb_002272_140 Hb_002272_140 Hb_048653_020--Hb_002272_140 Hb_000172_300--Hb_000039_100 Hb_000172_300--Hb_116349_050 Hb_000172_300--Hb_011054_030 Hb_174829_040 Hb_174829_040 Hb_000172_300--Hb_174829_040 Hb_012702_010 Hb_012702_010 Hb_000172_300--Hb_012702_010 Hb_116349_050--Hb_174829_040 Hb_000414_100 Hb_000414_100 Hb_116349_050--Hb_000414_100 Hb_002042_190 Hb_002042_190 Hb_116349_050--Hb_002042_190 Hb_116349_050--Hb_000039_100 Hb_000307_110 Hb_000307_110 Hb_003086_050--Hb_000307_110 Hb_015978_030 Hb_015978_030 Hb_003086_050--Hb_015978_030 Hb_003086_050--Hb_116349_050 Hb_000103_400 Hb_000103_400 Hb_003086_050--Hb_000103_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.78216 209.937 9.34557 11.4993 1.82664 0.904749
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.07887 4.77465 3.7516 20.4901 1.54662

CAGE analysis