Hb_000172_300

Information

Type -
Description -
Location Contig172: 355493-357883
Sequence    

Annotation

kegg
ID rcu:RCOM_0984870
description l-ascorbate oxidase, putative (EC:1.10.3.3)
nr
ID XP_012093248.1
description PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
swissprot
ID P14133
description L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1
trembl
ID A0A067LEI7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24095 PE=4 SV=1
Gene Ontology
ID GO:0005576
description l-ascorbate oxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16143: 356274-356776
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000172_300 0.0 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
2 Hb_000039_100 0.0919805277 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
3 Hb_116349_050 0.0997260208 - - formin homology 2 domain-containing family protein [Populus trichocarpa]
4 Hb_048653_040 0.0999758223 - - ankyrin repeat family protein [Populus trichocarpa]
5 Hb_011054_030 0.1084273486 - - PREDICTED: uncharacterized protein LOC103324687 [Prunus mume]
6 Hb_174829_040 0.1098303376 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
7 Hb_012702_010 0.11203182 - - PREDICTED: TMV resistance protein N-like isoform X4 [Vitis vinifera]
8 Hb_000210_150 0.114032492 - - PREDICTED: protein YLS9-like [Jatropha curcas]
9 Hb_002042_190 0.1167400979 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
10 Hb_004267_070 0.1235543938 - - latex allene oxide synthase [Hevea brasiliensis]
11 Hb_001437_200 0.1240623509 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
12 Hb_000347_370 0.1283335736 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
13 Hb_004531_010 0.1305530344 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]
14 Hb_000181_080 0.130904678 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
15 Hb_055706_010 0.1311155803 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
16 Hb_005882_020 0.1388527511 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
17 Hb_029866_140 0.1396512281 - - PREDICTED: hevamine-A [Jatropha curcas]
18 Hb_013057_030 0.1399112437 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000414_100 0.140849657 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
20 Hb_000627_140 0.1415462438 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000172_300 Hb_000172_300 Hb_000039_100 Hb_000039_100 Hb_000172_300--Hb_000039_100 Hb_116349_050 Hb_116349_050 Hb_000172_300--Hb_116349_050 Hb_048653_040 Hb_048653_040 Hb_000172_300--Hb_048653_040 Hb_011054_030 Hb_011054_030 Hb_000172_300--Hb_011054_030 Hb_174829_040 Hb_174829_040 Hb_000172_300--Hb_174829_040 Hb_012702_010 Hb_012702_010 Hb_000172_300--Hb_012702_010 Hb_000039_100--Hb_011054_030 Hb_001274_040 Hb_001274_040 Hb_000039_100--Hb_001274_040 Hb_000039_100--Hb_048653_040 Hb_001437_200 Hb_001437_200 Hb_000039_100--Hb_001437_200 Hb_005081_060 Hb_005081_060 Hb_000039_100--Hb_005081_060 Hb_116349_050--Hb_174829_040 Hb_000414_100 Hb_000414_100 Hb_116349_050--Hb_000414_100 Hb_002042_190 Hb_002042_190 Hb_116349_050--Hb_002042_190 Hb_116349_050--Hb_048653_040 Hb_116349_050--Hb_000039_100 Hb_048653_040--Hb_011054_030 Hb_048653_040--Hb_001437_200 Hb_055706_010 Hb_055706_010 Hb_048653_040--Hb_055706_010 Hb_005054_300 Hb_005054_300 Hb_011054_030--Hb_005054_300 Hb_021596_070 Hb_021596_070 Hb_011054_030--Hb_021596_070 Hb_111985_060 Hb_111985_060 Hb_011054_030--Hb_111985_060 Hb_008667_020 Hb_008667_020 Hb_011054_030--Hb_008667_020 Hb_029866_140 Hb_029866_140 Hb_011054_030--Hb_029866_140 Hb_000142_010 Hb_000142_010 Hb_174829_040--Hb_000142_010 Hb_174829_040--Hb_002042_190 Hb_002311_490 Hb_002311_490 Hb_174829_040--Hb_002311_490 Hb_174829_040--Hb_000414_100 Hb_019961_010 Hb_019961_010 Hb_012702_010--Hb_019961_010 Hb_002272_140 Hb_002272_140 Hb_012702_010--Hb_002272_140 Hb_138628_010 Hb_138628_010 Hb_012702_010--Hb_138628_010 Hb_004531_010 Hb_004531_010 Hb_012702_010--Hb_004531_010 Hb_012702_010--Hb_011054_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.083788 22.9257 1.33012 2.6358 0.0187304 0.145168
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.191235 0.267507 0.15875 2.22053 0.389275

CAGE analysis