Hb_000152_860

Information

Type -
Description -
Location Contig152: 693794-696814
Sequence    

Annotation

kegg
ID rcu:RCOM_1500640
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002510965.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID B9R9U0
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1500640 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_860 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_000139_100 0.168627162 - - PREDICTED: sugar transport protein 13-like [Jatropha curcas]
3 Hb_001472_130 0.1761460657 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
4 Hb_031295_010 0.1956940739 - - hypothetical protein JCGZ_19530 [Jatropha curcas]
5 Hb_000417_420 0.2053219536 - - PREDICTED: U-box domain-containing protein 17 [Jatropha curcas]
6 Hb_000809_080 0.2065881144 - - 50S ribosomal protein L25, putative [Ricinus communis]
7 Hb_005496_070 0.2132375819 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
8 Hb_000221_060 0.2234812553 - - -
9 Hb_156850_080 0.2278295092 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
10 Hb_000809_090 0.233614766 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
11 Hb_000672_150 0.2384339574 - - Patatin T5 precursor, putative [Ricinus communis]
12 Hb_000072_330 0.2400793887 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000538_170 0.2436734154 - - PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Jatropha curcas]
14 Hb_000975_330 0.244280939 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
15 Hb_000574_120 0.2454646511 - - conserved hypothetical protein [Ricinus communis]
16 Hb_005048_050 0.2483104768 - - Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative [Ricinus communis]
17 Hb_000103_400 0.2485830473 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
18 Hb_000307_110 0.249893734 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
19 Hb_001195_730 0.253492774 - - PREDICTED: protein LYK5-like [Jatropha curcas]
20 Hb_008078_020 0.2535284898 - - hypothetical protein JCGZ_01297 [Jatropha curcas]

Gene co-expression network

sample Hb_000152_860 Hb_000152_860 Hb_000139_100 Hb_000139_100 Hb_000152_860--Hb_000139_100 Hb_001472_130 Hb_001472_130 Hb_000152_860--Hb_001472_130 Hb_031295_010 Hb_031295_010 Hb_000152_860--Hb_031295_010 Hb_000417_420 Hb_000417_420 Hb_000152_860--Hb_000417_420 Hb_000809_080 Hb_000809_080 Hb_000152_860--Hb_000809_080 Hb_005496_070 Hb_005496_070 Hb_000152_860--Hb_005496_070 Hb_000139_100--Hb_005496_070 Hb_000672_150 Hb_000672_150 Hb_000139_100--Hb_000672_150 Hb_001511_250 Hb_001511_250 Hb_000139_100--Hb_001511_250 Hb_000813_160 Hb_000813_160 Hb_000139_100--Hb_000813_160 Hb_000139_100--Hb_001472_130 Hb_001472_130--Hb_000809_080 Hb_000038_040 Hb_000038_040 Hb_001472_130--Hb_000038_040 Hb_000805_230 Hb_000805_230 Hb_001472_130--Hb_000805_230 Hb_006935_010 Hb_006935_010 Hb_001472_130--Hb_006935_010 Hb_000221_060 Hb_000221_060 Hb_001472_130--Hb_000221_060 Hb_001472_130--Hb_000417_420 Hb_031295_010--Hb_001472_130 Hb_006414_020 Hb_006414_020 Hb_031295_010--Hb_006414_020 Hb_031295_010--Hb_000809_080 Hb_000856_410 Hb_000856_410 Hb_031295_010--Hb_000856_410 Hb_000103_400 Hb_000103_400 Hb_031295_010--Hb_000103_400 Hb_012107_010 Hb_012107_010 Hb_000417_420--Hb_012107_010 Hb_000179_230 Hb_000179_230 Hb_000417_420--Hb_000179_230 Hb_002053_130 Hb_002053_130 Hb_000417_420--Hb_002053_130 Hb_001437_010 Hb_001437_010 Hb_000417_420--Hb_001437_010 Hb_028207_040 Hb_028207_040 Hb_000417_420--Hb_028207_040 Hb_000809_080--Hb_000221_060 Hb_002918_150 Hb_002918_150 Hb_000809_080--Hb_002918_150 Hb_000809_080--Hb_006935_010 Hb_000803_060 Hb_000803_060 Hb_000809_080--Hb_000803_060 Hb_000809_080--Hb_000103_400 Hb_005976_040 Hb_005976_040 Hb_005496_070--Hb_005976_040 Hb_006043_020 Hb_006043_020 Hb_005496_070--Hb_006043_020 Hb_000345_500 Hb_000345_500 Hb_005496_070--Hb_000345_500 Hb_018563_020 Hb_018563_020 Hb_005496_070--Hb_018563_020 Hb_002053_030 Hb_002053_030 Hb_005496_070--Hb_002053_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.362076 0.0490172 0.0473539 0.0190796 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0144087 0.0680313 0.0433842 0.017988 0.0483895

CAGE analysis