Hb_031295_010

Information

Type -
Description -
Location Contig31295: 317-1147
Sequence    

Annotation

kegg
ID pxb:103935471
description TMV resistance protein N-like
nr
ID KDP28979.1
description hypothetical protein JCGZ_19530 [Jatropha curcas]
swissprot
ID O23530
description Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
trembl
ID A0A067KAY0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19530 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031295_010 0.0 - - hypothetical protein JCGZ_19530 [Jatropha curcas]
2 Hb_000152_860 0.1956940739 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_001472_130 0.2114701622 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
4 Hb_006414_020 0.2217361545 transcription factor TF Family: MYB -
5 Hb_000809_080 0.2229275712 - - 50S ribosomal protein L25, putative [Ricinus communis]
6 Hb_000856_410 0.2286508758 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_000103_400 0.2295379195 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
8 Hb_000179_230 0.2330430403 - - PREDICTED: myosin-17 [Jatropha curcas]
9 Hb_000015_180 0.233372007 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
10 Hb_003038_010 0.2337626745 - - ubiquitin-protein ligase, putative [Ricinus communis]
11 Hb_078901_010 0.2378115442 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
12 Hb_004787_100 0.2388384718 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
13 Hb_000221_060 0.239147563 - - -
14 Hb_000417_420 0.2391630813 - - PREDICTED: U-box domain-containing protein 17 [Jatropha curcas]
15 Hb_001489_120 0.2422895535 - - PREDICTED: alpha-amylase 3, chloroplastic [Jatropha curcas]
16 Hb_182750_010 0.2428853127 - - hypothetical protein MIMGU_mgv1a0001602mg, partial [Erythranthe guttata]
17 Hb_008078_020 0.2431306232 - - hypothetical protein JCGZ_01297 [Jatropha curcas]
18 Hb_000220_090 0.2451828678 - - PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Jatropha curcas]
19 Hb_156850_080 0.2469124638 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
20 Hb_005545_070 0.2481164956 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]

Gene co-expression network

sample Hb_031295_010 Hb_031295_010 Hb_000152_860 Hb_000152_860 Hb_031295_010--Hb_000152_860 Hb_001472_130 Hb_001472_130 Hb_031295_010--Hb_001472_130 Hb_006414_020 Hb_006414_020 Hb_031295_010--Hb_006414_020 Hb_000809_080 Hb_000809_080 Hb_031295_010--Hb_000809_080 Hb_000856_410 Hb_000856_410 Hb_031295_010--Hb_000856_410 Hb_000103_400 Hb_000103_400 Hb_031295_010--Hb_000103_400 Hb_000139_100 Hb_000139_100 Hb_000152_860--Hb_000139_100 Hb_000152_860--Hb_001472_130 Hb_000417_420 Hb_000417_420 Hb_000152_860--Hb_000417_420 Hb_000152_860--Hb_000809_080 Hb_005496_070 Hb_005496_070 Hb_000152_860--Hb_005496_070 Hb_001472_130--Hb_000809_080 Hb_000038_040 Hb_000038_040 Hb_001472_130--Hb_000038_040 Hb_000805_230 Hb_000805_230 Hb_001472_130--Hb_000805_230 Hb_006935_010 Hb_006935_010 Hb_001472_130--Hb_006935_010 Hb_000221_060 Hb_000221_060 Hb_001472_130--Hb_000221_060 Hb_001472_130--Hb_000417_420 Hb_000803_060 Hb_000803_060 Hb_006414_020--Hb_000803_060 Hb_001489_120 Hb_001489_120 Hb_006414_020--Hb_001489_120 Hb_012787_040 Hb_012787_040 Hb_006414_020--Hb_012787_040 Hb_011360_090 Hb_011360_090 Hb_006414_020--Hb_011360_090 Hb_006414_020--Hb_000103_400 Hb_001258_150 Hb_001258_150 Hb_006414_020--Hb_001258_150 Hb_000809_080--Hb_000221_060 Hb_002918_150 Hb_002918_150 Hb_000809_080--Hb_002918_150 Hb_000809_080--Hb_006935_010 Hb_000809_080--Hb_000803_060 Hb_000809_080--Hb_000103_400 Hb_008253_040 Hb_008253_040 Hb_000856_410--Hb_008253_040 Hb_000172_080 Hb_000172_080 Hb_000856_410--Hb_000172_080 Hb_004030_070 Hb_004030_070 Hb_000856_410--Hb_004030_070 Hb_072276_010 Hb_072276_010 Hb_000856_410--Hb_072276_010 Hb_078901_010 Hb_078901_010 Hb_000856_410--Hb_078901_010 Hb_004166_010 Hb_004166_010 Hb_000856_410--Hb_004166_010 Hb_002272_140 Hb_002272_140 Hb_000103_400--Hb_002272_140 Hb_000181_080 Hb_000181_080 Hb_000103_400--Hb_000181_080 Hb_000473_080 Hb_000473_080 Hb_000103_400--Hb_000473_080 Hb_000359_080 Hb_000359_080 Hb_000103_400--Hb_000359_080 Hb_000103_400--Hb_000803_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.08958 0.174238 0.156486 0.0288426 0.0852907
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.155836 0.0941013 0.0420279 0.10444

CAGE analysis