Hb_163256_010

Information

Type -
Description -
Location Contig163256: 3424-12140
Sequence    

Annotation

kegg
ID rcu:RCOM_1498100
description phosphoglucomutase, putative (EC:5.4.2.2)
nr
ID XP_012090350.1
description PREDICTED: phosphoglucomutase, chloroplastic [Jatropha curcas]
swissprot
ID Q9SM59
description Phosphoglucomutase, chloroplastic OS=Pisum sativum GN=PGMP PE=2 SV=1
trembl
ID A0A067JEU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26183 PE=4 SV=1
Gene Ontology
ID GO:0000287
description phosphoglucomutase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14872: 3450-12092
cDNA
(Sanger)
(ID:Location)		 024_A04.ab1: 10547-12062 , 026_A20.ab1: 10547-12060 , 027_M07.ab1: 9718-12060

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_163256_010 0.0 - - PREDICTED: phosphoglucomutase, chloroplastic [Jatropha curcas]
2 Hb_000009_030 0.0866782834 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
3 Hb_001221_180 0.0881696712 - - calcineurin-like phosphoesterase [Manihot esculenta]
4 Hb_003683_010 0.0883627763 - - longevity assurance factor, putative [Ricinus communis]
5 Hb_005260_030 0.0885364155 - - PREDICTED: uncharacterized protein LOC105633782 [Jatropha curcas]
6 Hb_005489_040 0.0929127273 - - PREDICTED: cullin-1 [Jatropha curcas]
7 Hb_012330_010 0.0934758389 - - PREDICTED: polyadenylate-binding protein-interacting protein 12-like isoform X1 [Jatropha curcas]
8 Hb_012733_070 0.0947751234 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Jatropha curcas]
9 Hb_001348_080 0.0974742374 - - PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X1 [Jatropha curcas]
10 Hb_028960_020 0.0983650404 - - PREDICTED: uncharacterized protein LOC105646163 isoform X1 [Jatropha curcas]
11 Hb_006189_020 0.1019454972 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
12 Hb_008387_020 0.1029384377 - - PREDICTED: FHA domain-containing protein DDL isoform X1 [Jatropha curcas]
13 Hb_002006_150 0.103040558 - - copine, putative [Ricinus communis]
14 Hb_005601_020 0.1043814856 - - PREDICTED: ankyrin repeat domain-containing protein 2 [Jatropha curcas]
15 Hb_000103_570 0.1044577075 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic [Jatropha curcas]
16 Hb_073171_070 0.1051641839 - - PREDICTED: RNA polymerase II-associated factor 1 homolog [Jatropha curcas]
17 Hb_000665_120 0.1072006962 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105637593 [Jatropha curcas]
18 Hb_003280_020 0.1076302222 - - PREDICTED: enhancer of mRNA-decapping protein 4 isoform X1 [Jatropha curcas]
19 Hb_000300_470 0.1078364168 - - PREDICTED: nucleolin-like [Jatropha curcas]
20 Hb_003093_040 0.1080029136 - - PREDICTED: nucleolar complex protein 4 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_163256_010 Hb_163256_010 Hb_000009_030 Hb_000009_030 Hb_163256_010--Hb_000009_030 Hb_001221_180 Hb_001221_180 Hb_163256_010--Hb_001221_180 Hb_003683_010 Hb_003683_010 Hb_163256_010--Hb_003683_010 Hb_005260_030 Hb_005260_030 Hb_163256_010--Hb_005260_030 Hb_005489_040 Hb_005489_040 Hb_163256_010--Hb_005489_040 Hb_012330_010 Hb_012330_010 Hb_163256_010--Hb_012330_010 Hb_000976_110 Hb_000976_110 Hb_000009_030--Hb_000976_110 Hb_000009_030--Hb_005489_040 Hb_000318_150 Hb_000318_150 Hb_000009_030--Hb_000318_150 Hb_000787_200 Hb_000787_200 Hb_000009_030--Hb_000787_200 Hb_160608_010 Hb_160608_010 Hb_000009_030--Hb_160608_010 Hb_001587_030 Hb_001587_030 Hb_000009_030--Hb_001587_030 Hb_002357_070 Hb_002357_070 Hb_001221_180--Hb_002357_070 Hb_000011_270 Hb_000011_270 Hb_001221_180--Hb_000011_270 Hb_019840_030 Hb_019840_030 Hb_001221_180--Hb_019840_030 Hb_060980_010 Hb_060980_010 Hb_001221_180--Hb_060980_010 Hb_003093_040 Hb_003093_040 Hb_001221_180--Hb_003093_040 Hb_000568_050 Hb_000568_050 Hb_001221_180--Hb_000568_050 Hb_000742_170 Hb_000742_170 Hb_003683_010--Hb_000742_170 Hb_028960_030 Hb_028960_030 Hb_003683_010--Hb_028960_030 Hb_003777_290 Hb_003777_290 Hb_003683_010--Hb_003777_290 Hb_003683_010--Hb_000009_030 Hb_003683_010--Hb_005489_040 Hb_005260_030--Hb_005489_040 Hb_007413_010 Hb_007413_010 Hb_005260_030--Hb_007413_010 Hb_073171_070 Hb_073171_070 Hb_005260_030--Hb_073171_070 Hb_003117_030 Hb_003117_030 Hb_005260_030--Hb_003117_030 Hb_017469_110 Hb_017469_110 Hb_005260_030--Hb_017469_110 Hb_000270_170 Hb_000270_170 Hb_005260_030--Hb_000270_170 Hb_000409_050 Hb_000409_050 Hb_005489_040--Hb_000409_050 Hb_005489_040--Hb_073171_070 Hb_005489_040--Hb_003117_030 Hb_005489_040--Hb_007413_010 Hb_188281_040 Hb_188281_040 Hb_005489_040--Hb_188281_040 Hb_012733_070 Hb_012733_070 Hb_012330_010--Hb_012733_070 Hb_003280_020 Hb_003280_020 Hb_012330_010--Hb_003280_020 Hb_001348_080 Hb_001348_080 Hb_012330_010--Hb_001348_080 Hb_008511_020 Hb_008511_020 Hb_012330_010--Hb_008511_020 Hb_002749_060 Hb_002749_060 Hb_012330_010--Hb_002749_060 Hb_002027_080 Hb_002027_080 Hb_012330_010--Hb_002027_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.7745 15.0117 25.8076 16.5458 14.5659 12.8465
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.5101 6.72953 11.3435 29.6642 32.3677

CAGE analysis