Hb_007413_010

Information

Type -
Description -
Location Contig7413: 21968-29260
Sequence    

Annotation

kegg
ID rcu:RCOM_1448820
description ubiquitin-activating enzyme E1b, putative
nr
ID XP_012067212.1
description PREDICTED: SUMO-activating enzyme subunit 2 [Jatropha curcas]
swissprot
ID Q9SJT1
description SUMO-activating enzyme subunit 2 OS=Arabidopsis thaliana GN=SAE2 PE=1 SV=1
trembl
ID A0A067L025
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26770 PE=4 SV=1
Gene Ontology
ID GO:0005829
description sumo-activating enzyme subunit 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56390: 22101-29161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007413_010 0.0 - - PREDICTED: SUMO-activating enzyme subunit 2 [Jatropha curcas]
2 Hb_006913_020 0.0444640334 - - PREDICTED: uncharacterized protein LOC105649145 isoform X1 [Jatropha curcas]
3 Hb_003117_030 0.0544555437 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
4 Hb_008948_020 0.0566117739 - - hypothetical protein JCGZ_21216 [Jatropha curcas]
5 Hb_001377_190 0.0572953796 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX3 isoform X2 [Jatropha curcas]
6 Hb_001925_060 0.0575347645 - - PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Jatropha curcas]
7 Hb_001789_110 0.0575443053 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_073171_070 0.0583778285 - - PREDICTED: RNA polymerase II-associated factor 1 homolog [Jatropha curcas]
9 Hb_005260_030 0.0614385759 - - PREDICTED: uncharacterized protein LOC105633782 [Jatropha curcas]
10 Hb_005489_040 0.062944034 - - PREDICTED: cullin-1 [Jatropha curcas]
11 Hb_021374_030 0.0639949742 - - hypothetical protein RCOM_0351490 [Ricinus communis]
12 Hb_003040_050 0.0655956201 - - PREDICTED: uncharacterized protein LOC105638219 [Jatropha curcas]
13 Hb_000139_080 0.0659820375 - - PREDICTED: vacuole membrane protein KMS1 isoform X2 [Jatropha curcas]
14 Hb_002581_010 0.06659944 - - PREDICTED: uncharacterized protein LOC105641469 isoform X2 [Jatropha curcas]
15 Hb_033312_040 0.0666912678 - - PREDICTED: gamma-tubulin complex component 5-like isoform X1 [Jatropha curcas]
16 Hb_000169_020 0.06817343 transcription factor TF Family: C2C2-CO-like hypothetical protein RCOM_0555710 [Ricinus communis]
17 Hb_000599_270 0.0682686686 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X3 [Jatropha curcas]
18 Hb_004333_040 0.0686889228 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
19 Hb_033312_130 0.0691337038 - - PREDICTED: protein TIC 40, chloroplastic [Jatropha curcas]
20 Hb_002205_030 0.0710786828 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_007413_010 Hb_007413_010 Hb_006913_020 Hb_006913_020 Hb_007413_010--Hb_006913_020 Hb_003117_030 Hb_003117_030 Hb_007413_010--Hb_003117_030 Hb_008948_020 Hb_008948_020 Hb_007413_010--Hb_008948_020 Hb_001377_190 Hb_001377_190 Hb_007413_010--Hb_001377_190 Hb_001925_060 Hb_001925_060 Hb_007413_010--Hb_001925_060 Hb_001789_110 Hb_001789_110 Hb_007413_010--Hb_001789_110 Hb_021374_030 Hb_021374_030 Hb_006913_020--Hb_021374_030 Hb_006913_020--Hb_008948_020 Hb_006913_020--Hb_001377_190 Hb_006913_020--Hb_001789_110 Hb_003098_070 Hb_003098_070 Hb_006913_020--Hb_003098_070 Hb_002581_010 Hb_002581_010 Hb_003117_030--Hb_002581_010 Hb_005489_040 Hb_005489_040 Hb_003117_030--Hb_005489_040 Hb_188281_040 Hb_188281_040 Hb_003117_030--Hb_188281_040 Hb_003117_030--Hb_001789_110 Hb_003117_030--Hb_001925_060 Hb_002411_110 Hb_002411_110 Hb_008948_020--Hb_002411_110 Hb_001716_040 Hb_001716_040 Hb_008948_020--Hb_001716_040 Hb_004435_030 Hb_004435_030 Hb_008948_020--Hb_004435_030 Hb_005582_040 Hb_005582_040 Hb_008948_020--Hb_005582_040 Hb_000189_600 Hb_000189_600 Hb_001377_190--Hb_000189_600 Hb_000363_310 Hb_000363_310 Hb_001377_190--Hb_000363_310 Hb_000749_010 Hb_000749_010 Hb_001377_190--Hb_000749_010 Hb_001377_190--Hb_001925_060 Hb_001925_060--Hb_002411_110 Hb_003040_050 Hb_003040_050 Hb_001925_060--Hb_003040_050 Hb_011174_020 Hb_011174_020 Hb_001925_060--Hb_011174_020 Hb_000317_100 Hb_000317_100 Hb_001925_060--Hb_000317_100 Hb_000795_040 Hb_000795_040 Hb_001925_060--Hb_000795_040 Hb_027073_020 Hb_027073_020 Hb_001789_110--Hb_027073_020 Hb_003517_040 Hb_003517_040 Hb_001789_110--Hb_003517_040 Hb_122968_010 Hb_122968_010 Hb_001789_110--Hb_122968_010 Hb_001789_110--Hb_188281_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.72174 12.7603 13.926 12.359 6.52849 10.1419
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.27296 8.80791 7.71092 13.8211 19.3383

CAGE analysis