Hb_000189_600

Information

Type -
Description -
Location Contig189: 497007-531606
Sequence    

Annotation

kegg
ID pop:POPTR_0030s00330g
description hypothetical protein
nr
ID XP_012089201.1
description PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]
swissprot
ID Q6GP04
description Protein MON2 homolog OS=Xenopus laevis GN=mon2 PE=2 SV=1
trembl
ID A0A067JVR3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23452 PE=4 SV=1
Gene Ontology
ID GO:0015031
description protein mon2 homolog isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18716: 497160-512987 , PASA_asmbl_18717: 517094-531456 , PASA_asmbl_18720: 523395-523723
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000189_600 0.0 - - PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]
2 Hb_004333_040 0.0573092969 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
3 Hb_183433_010 0.0582069214 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
4 Hb_000617_230 0.0589167754 - - PREDICTED: tafazzin isoform X1 [Jatropha curcas]
5 Hb_001377_190 0.0591500015 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX3 isoform X2 [Jatropha curcas]
6 Hb_001430_080 0.0624626376 - - PREDICTED: putative mediator of RNA polymerase II transcription subunit 26 [Jatropha curcas]
7 Hb_000521_330 0.0634403672 - - conserved hypothetical protein [Ricinus communis]
8 Hb_183510_020 0.0642234543 - - coated vesicle membrane protein, putative [Ricinus communis]
9 Hb_000710_040 0.0651301316 - - PREDICTED: HEAT repeat-containing protein 6 [Jatropha curcas]
10 Hb_001225_040 0.0657993005 - - PREDICTED: meiosis-specific nuclear structural protein 1 isoform X5 [Jatropha curcas]
11 Hb_000339_040 0.0667392995 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
12 Hb_005730_040 0.06728633 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
13 Hb_000976_140 0.0673623593 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
14 Hb_008114_040 0.0679026004 - - Fanconi anemia group D2 [Gossypium arboreum]
15 Hb_002889_010 0.0683731704 - - ubx domain-containing, putative [Ricinus communis]
16 Hb_005867_070 0.0689565261 - - DNA binding protein, putative [Ricinus communis]
17 Hb_004109_320 0.0694995192 - - PREDICTED: vacuolar protein sorting-associated protein 52 A [Jatropha curcas]
18 Hb_001241_010 0.070376912 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_004837_180 0.0704331999 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
20 Hb_001720_040 0.0710662574 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000189_600 Hb_000189_600 Hb_004333_040 Hb_004333_040 Hb_000189_600--Hb_004333_040 Hb_183433_010 Hb_183433_010 Hb_000189_600--Hb_183433_010 Hb_000617_230 Hb_000617_230 Hb_000189_600--Hb_000617_230 Hb_001377_190 Hb_001377_190 Hb_000189_600--Hb_001377_190 Hb_001430_080 Hb_001430_080 Hb_000189_600--Hb_001430_080 Hb_000521_330 Hb_000521_330 Hb_000189_600--Hb_000521_330 Hb_006189_020 Hb_006189_020 Hb_004333_040--Hb_006189_020 Hb_033312_040 Hb_033312_040 Hb_004333_040--Hb_033312_040 Hb_000699_150 Hb_000699_150 Hb_004333_040--Hb_000699_150 Hb_000510_360 Hb_000510_360 Hb_004333_040--Hb_000510_360 Hb_004333_040--Hb_183433_010 Hb_000976_140 Hb_000976_140 Hb_183433_010--Hb_000976_140 Hb_171900_090 Hb_171900_090 Hb_183433_010--Hb_171900_090 Hb_002413_010 Hb_002413_010 Hb_183433_010--Hb_002413_010 Hb_007248_030 Hb_007248_030 Hb_183433_010--Hb_007248_030 Hb_000365_230 Hb_000365_230 Hb_183433_010--Hb_000365_230 Hb_000617_230--Hb_001430_080 Hb_001878_050 Hb_001878_050 Hb_000617_230--Hb_001878_050 Hb_003835_070 Hb_003835_070 Hb_000617_230--Hb_003835_070 Hb_001279_170 Hb_001279_170 Hb_000617_230--Hb_001279_170 Hb_001009_280 Hb_001009_280 Hb_000617_230--Hb_001009_280 Hb_007413_010 Hb_007413_010 Hb_001377_190--Hb_007413_010 Hb_006913_020 Hb_006913_020 Hb_001377_190--Hb_006913_020 Hb_000363_310 Hb_000363_310 Hb_001377_190--Hb_000363_310 Hb_000749_010 Hb_000749_010 Hb_001377_190--Hb_000749_010 Hb_001925_060 Hb_001925_060 Hb_001377_190--Hb_001925_060 Hb_000011_100 Hb_000011_100 Hb_001430_080--Hb_000011_100 Hb_001277_020 Hb_001277_020 Hb_001430_080--Hb_001277_020 Hb_004976_010 Hb_004976_010 Hb_001430_080--Hb_004976_010 Hb_000645_170 Hb_000645_170 Hb_001430_080--Hb_000645_170 Hb_001430_080--Hb_003835_070 Hb_000879_040 Hb_000879_040 Hb_001430_080--Hb_000879_040 Hb_002492_010 Hb_002492_010 Hb_000521_330--Hb_002492_010 Hb_004143_100 Hb_004143_100 Hb_000521_330--Hb_004143_100 Hb_000089_180 Hb_000089_180 Hb_000521_330--Hb_000089_180 Hb_000029_060 Hb_000029_060 Hb_000521_330--Hb_000029_060 Hb_003906_200 Hb_003906_200 Hb_000521_330--Hb_003906_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.97429 8.39655 8.23668 6.50527 4.70344 5.53978
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.3904 5.5234 3.88992 7.79567 6.9547

CAGE analysis