Hb_000699_150

Information

Type -
Description -
Location Contig699: 103069-111125
Sequence    

Annotation

kegg
ID tcc:TCM_026254
description AT hook motif DNA-binding family protein
nr
ID XP_012089303.1
description PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
swissprot
ID A1L4X7
description AT-hook motif nuclear-localized protein 14 OS=Arabidopsis thaliana GN=AHL14 PE=1 SV=1
trembl
ID A0A0D2SKR1
description Gossypium raimondii chromosome 7, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_007G280000 PE=4 SV=1
Gene Ontology
ID GO:0003677
description dna-binding protein escarola

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54684: 103140-110997
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000699_150 0.0 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
2 Hb_183433_010 0.0620752517 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
3 Hb_004333_040 0.0633353165 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
4 Hb_007472_070 0.0638005211 - - cir, putative [Ricinus communis]
5 Hb_003098_070 0.0692769859 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
6 Hb_000365_230 0.0713998904 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
7 Hb_000176_020 0.0729066568 - - PREDICTED: nuclear pore complex protein NUP43 [Jatropha curcas]
8 Hb_002126_030 0.0736164401 - - ferrochelatase, putative [Ricinus communis]
9 Hb_164390_010 0.0741333236 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
10 Hb_000292_100 0.0760201135 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
11 Hb_189216_010 0.0769118384 - - PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
12 Hb_006059_040 0.0806696219 transcription factor TF Family: SOH1 hypothetical protein PHAVU_007G063000g [Phaseolus vulgaris]
13 Hb_006588_060 0.0808331892 - - PREDICTED: DDB1- and CUL4-associated factor 13 [Jatropha curcas]
14 Hb_163175_010 0.0811851448 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
15 Hb_007413_010 0.081383477 - - PREDICTED: SUMO-activating enzyme subunit 2 [Jatropha curcas]
16 Hb_004705_170 0.0814058402 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
17 Hb_001635_110 0.081582476 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
18 Hb_000189_600 0.0816624064 - - PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]
19 Hb_006913_020 0.081930263 - - PREDICTED: uncharacterized protein LOC105649145 isoform X1 [Jatropha curcas]
20 Hb_008948_020 0.0823896076 - - hypothetical protein JCGZ_21216 [Jatropha curcas]

Gene co-expression network

sample Hb_000699_150 Hb_000699_150 Hb_183433_010 Hb_183433_010 Hb_000699_150--Hb_183433_010 Hb_004333_040 Hb_004333_040 Hb_000699_150--Hb_004333_040 Hb_007472_070 Hb_007472_070 Hb_000699_150--Hb_007472_070 Hb_003098_070 Hb_003098_070 Hb_000699_150--Hb_003098_070 Hb_000365_230 Hb_000365_230 Hb_000699_150--Hb_000365_230 Hb_000176_020 Hb_000176_020 Hb_000699_150--Hb_000176_020 Hb_000976_140 Hb_000976_140 Hb_183433_010--Hb_000976_140 Hb_171900_090 Hb_171900_090 Hb_183433_010--Hb_171900_090 Hb_002413_010 Hb_002413_010 Hb_183433_010--Hb_002413_010 Hb_000189_600 Hb_000189_600 Hb_183433_010--Hb_000189_600 Hb_007248_030 Hb_007248_030 Hb_183433_010--Hb_007248_030 Hb_183433_010--Hb_000365_230 Hb_006189_020 Hb_006189_020 Hb_004333_040--Hb_006189_020 Hb_033312_040 Hb_033312_040 Hb_004333_040--Hb_033312_040 Hb_004333_040--Hb_000189_600 Hb_000510_360 Hb_000510_360 Hb_004333_040--Hb_000510_360 Hb_004333_040--Hb_183433_010 Hb_004705_170 Hb_004705_170 Hb_007472_070--Hb_004705_170 Hb_000778_010 Hb_000778_010 Hb_007472_070--Hb_000778_010 Hb_000215_300 Hb_000215_300 Hb_007472_070--Hb_000215_300 Hb_000347_250 Hb_000347_250 Hb_007472_070--Hb_000347_250 Hb_006059_040 Hb_006059_040 Hb_007472_070--Hb_006059_040 Hb_000139_080 Hb_000139_080 Hb_003098_070--Hb_000139_080 Hb_003098_070--Hb_000365_230 Hb_003098_070--Hb_006189_020 Hb_003098_070--Hb_033312_040 Hb_000476_060 Hb_000476_060 Hb_003098_070--Hb_000476_060 Hb_000078_140 Hb_000078_140 Hb_003098_070--Hb_000078_140 Hb_164390_010 Hb_164390_010 Hb_000365_230--Hb_164390_010 Hb_004109_320 Hb_004109_320 Hb_000365_230--Hb_004109_320 Hb_007894_150 Hb_007894_150 Hb_000365_230--Hb_007894_150 Hb_062226_130 Hb_062226_130 Hb_000365_230--Hb_062226_130 Hb_000365_230--Hb_000778_010 Hb_000176_020--Hb_171900_090 Hb_001623_270 Hb_001623_270 Hb_000176_020--Hb_001623_270 Hb_001025_090 Hb_001025_090 Hb_000176_020--Hb_001025_090 Hb_000230_460 Hb_000230_460 Hb_000176_020--Hb_000230_460 Hb_000789_320 Hb_000789_320 Hb_000176_020--Hb_000789_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.3497 13.9953 16.382 14.0301 5.68376 8.85621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.7029 13.3427 6.8519 13.3298 14.5258

CAGE analysis