Hb_121921_010

Information

Type -
Description -
Location Contig121921: 563-949
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121921_010 0.0 - - -
2 Hb_004208_020 0.2793427957 - - phosphoglycerate kinase, putative [Ricinus communis]
3 Hb_002437_010 0.2882293737 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
4 Hb_000147_010 0.2896960325 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
5 Hb_011344_100 0.2921895291 - - -
6 Hb_005181_200 0.2924558304 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
7 Hb_000544_130 0.2943974476 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
8 Hb_176012_010 0.295284993 - - conserved hypothetical protein [Ricinus communis]
9 Hb_160814_010 0.2964843721 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
10 Hb_000002_150 0.2990787455 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000925_120 0.301125123 - - Spotted leaf protein, putative [Ricinus communis]
12 Hb_118707_010 0.302331362 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
13 Hb_000705_110 0.3065506564 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
14 Hb_003020_340 0.3095389622 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
15 Hb_116783_010 0.311807664 - - hypothetical protein POPTR_0011s16190g [Populus trichocarpa]
16 Hb_002217_040 0.3123386699 - - PREDICTED: boron transporter 1-like [Jatropha curcas]
17 Hb_004785_150 0.3125668689 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
18 Hb_000743_070 0.3163848418 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
19 Hb_009780_110 0.3166480537 - - PREDICTED: protein RSI-1 [Cicer arietinum]
20 Hb_003226_050 0.3203144445 - - Pectinesterase-3 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_121921_010 Hb_121921_010 Hb_004208_020 Hb_004208_020 Hb_121921_010--Hb_004208_020 Hb_002437_010 Hb_002437_010 Hb_121921_010--Hb_002437_010 Hb_000147_010 Hb_000147_010 Hb_121921_010--Hb_000147_010 Hb_011344_100 Hb_011344_100 Hb_121921_010--Hb_011344_100 Hb_005181_200 Hb_005181_200 Hb_121921_010--Hb_005181_200 Hb_000544_130 Hb_000544_130 Hb_121921_010--Hb_000544_130 Hb_004330_050 Hb_004330_050 Hb_004208_020--Hb_004330_050 Hb_001300_060 Hb_001300_060 Hb_004208_020--Hb_001300_060 Hb_010308_010 Hb_010308_010 Hb_004208_020--Hb_010308_010 Hb_000496_080 Hb_000496_080 Hb_004208_020--Hb_000496_080 Hb_020112_010 Hb_020112_010 Hb_004208_020--Hb_020112_010 Hb_006275_040 Hb_006275_040 Hb_004208_020--Hb_006275_040 Hb_014865_010 Hb_014865_010 Hb_002437_010--Hb_014865_010 Hb_001242_020 Hb_001242_020 Hb_002437_010--Hb_001242_020 Hb_001633_120 Hb_001633_120 Hb_002437_010--Hb_001633_120 Hb_000993_020 Hb_000993_020 Hb_002437_010--Hb_000993_020 Hb_000676_130 Hb_000676_130 Hb_002437_010--Hb_000676_130 Hb_000979_080 Hb_000979_080 Hb_002437_010--Hb_000979_080 Hb_000925_120 Hb_000925_120 Hb_000147_010--Hb_000925_120 Hb_160814_010 Hb_160814_010 Hb_000147_010--Hb_160814_010 Hb_000002_150 Hb_000002_150 Hb_000147_010--Hb_000002_150 Hb_116783_010 Hb_116783_010 Hb_000147_010--Hb_116783_010 Hb_003020_340 Hb_003020_340 Hb_000147_010--Hb_003020_340 Hb_000705_110 Hb_000705_110 Hb_000147_010--Hb_000705_110 Hb_001907_130 Hb_001907_130 Hb_011344_100--Hb_001907_130 Hb_170516_010 Hb_170516_010 Hb_011344_100--Hb_170516_010 Hb_115116_010 Hb_115116_010 Hb_011344_100--Hb_115116_010 Hb_065452_010 Hb_065452_010 Hb_011344_100--Hb_065452_010 Hb_033594_090 Hb_033594_090 Hb_011344_100--Hb_033594_090 Hb_005464_010 Hb_005464_010 Hb_011344_100--Hb_005464_010 Hb_005181_200--Hb_011344_100 Hb_000230_310 Hb_000230_310 Hb_005181_200--Hb_000230_310 Hb_005181_200--Hb_115116_010 Hb_004266_010 Hb_004266_010 Hb_005181_200--Hb_004266_010 Hb_002740_070 Hb_002740_070 Hb_005181_200--Hb_002740_070 Hb_003226_050 Hb_003226_050 Hb_000544_130--Hb_003226_050 Hb_000161_230 Hb_000161_230 Hb_000544_130--Hb_000161_230 Hb_002217_040 Hb_002217_040 Hb_000544_130--Hb_002217_040 Hb_000187_110 Hb_000187_110 Hb_000544_130--Hb_000187_110 Hb_000544_130--Hb_000979_080 Hb_001252_070 Hb_001252_070 Hb_000544_130--Hb_001252_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0961368 0.227622 0.112125 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.275295 0

CAGE analysis