Hb_121348_010

Information

Type -
Description -
Location Contig121348: 260-1013
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121348_010 0.0 - - -
2 Hb_001123_020 0.2220543023 - - PREDICTED: leucine-rich repeat receptor-like protein CLAVATA2 [Jatropha curcas]
3 Hb_004918_010 0.3378881074 - - protein binding protein, putative [Ricinus communis]
4 Hb_000866_180 0.3530200256 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Populus euphratica]
5 Hb_007100_020 0.3535811693 - - hypothetical protein POPTR_0473s00220g [Populus trichocarpa]
6 Hb_155403_010 0.3674540177 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_014361_030 0.3703939343 - - hypothetical protein POPTR_0005s18860g [Populus trichocarpa]
8 Hb_001623_600 0.3745016673 - - PREDICTED: uncharacterized protein LOC104748784 [Camelina sativa]
9 Hb_004586_200 0.377299792 - - PREDICTED: cyclin-D3-1-like [Jatropha curcas]
10 Hb_046823_010 0.378162687 - - hypothetical protein CICLE_v100021301mg, partial [Citrus clementina]
11 Hb_000049_110 0.3805540677 - - PREDICTED: subtilisin-like protease SBT1.2 [Jatropha curcas]
12 Hb_004689_040 0.3856133187 - - PREDICTED: uncharacterized protein LOC105648084 [Jatropha curcas]
13 Hb_007594_110 0.3911325829 - - fructokinase [Manihot esculenta]
14 Hb_001115_020 0.3960649646 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 2-like [Populus euphratica]
15 Hb_111528_010 0.396332417 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
16 Hb_002284_270 0.3979064885 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
17 Hb_003362_080 0.4006072414 - - beta-galactosidase, putative [Ricinus communis]
18 Hb_003929_100 0.4030182853 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL61 [Populus euphratica]
19 Hb_003040_030 0.4037163419 - - PREDICTED: NADP-dependent malic enzyme isoform X1 [Jatropha curcas]
20 Hb_010578_030 0.4064293234 - - PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_121348_010 Hb_121348_010 Hb_001123_020 Hb_001123_020 Hb_121348_010--Hb_001123_020 Hb_004918_010 Hb_004918_010 Hb_121348_010--Hb_004918_010 Hb_000866_180 Hb_000866_180 Hb_121348_010--Hb_000866_180 Hb_007100_020 Hb_007100_020 Hb_121348_010--Hb_007100_020 Hb_155403_010 Hb_155403_010 Hb_121348_010--Hb_155403_010 Hb_014361_030 Hb_014361_030 Hb_121348_010--Hb_014361_030 Hb_001123_020--Hb_155403_010 Hb_001623_600 Hb_001623_600 Hb_001123_020--Hb_001623_600 Hb_000085_420 Hb_000085_420 Hb_001123_020--Hb_000085_420 Hb_024714_040 Hb_024714_040 Hb_001123_020--Hb_024714_040 Hb_003487_010 Hb_003487_010 Hb_001123_020--Hb_003487_010 Hb_024758_030 Hb_024758_030 Hb_004918_010--Hb_024758_030 Hb_004918_010--Hb_007100_020 Hb_002601_050 Hb_002601_050 Hb_004918_010--Hb_002601_050 Hb_000307_040 Hb_000307_040 Hb_004918_010--Hb_000307_040 Hb_000077_170 Hb_000077_170 Hb_004918_010--Hb_000077_170 Hb_004918_010--Hb_000866_180 Hb_101517_010 Hb_101517_010 Hb_000866_180--Hb_101517_010 Hb_111528_010 Hb_111528_010 Hb_000866_180--Hb_111528_010 Hb_002284_270 Hb_002284_270 Hb_000866_180--Hb_002284_270 Hb_004096_200 Hb_004096_200 Hb_000866_180--Hb_004096_200 Hb_015141_010 Hb_015141_010 Hb_000866_180--Hb_015141_010 Hb_000340_200 Hb_000340_200 Hb_000866_180--Hb_000340_200 Hb_007100_020--Hb_024758_030 Hb_007885_020 Hb_007885_020 Hb_007100_020--Hb_007885_020 Hb_005357_180 Hb_005357_180 Hb_007100_020--Hb_005357_180 Hb_000300_100 Hb_000300_100 Hb_007100_020--Hb_000300_100 Hb_006152_040 Hb_006152_040 Hb_007100_020--Hb_006152_040 Hb_155403_010--Hb_003487_010 Hb_001386_030 Hb_001386_030 Hb_155403_010--Hb_001386_030 Hb_001195_700 Hb_001195_700 Hb_155403_010--Hb_001195_700 Hb_027751_010 Hb_027751_010 Hb_155403_010--Hb_027751_010 Hb_003155_060 Hb_003155_060 Hb_155403_010--Hb_003155_060 Hb_000120_990 Hb_000120_990 Hb_014361_030--Hb_000120_990 Hb_000172_380 Hb_000172_380 Hb_014361_030--Hb_000172_380 Hb_000390_190 Hb_000390_190 Hb_014361_030--Hb_000390_190 Hb_003641_030 Hb_003641_030 Hb_014361_030--Hb_003641_030 Hb_000320_340 Hb_000320_340 Hb_014361_030--Hb_000320_340 Hb_000521_090 Hb_000521_090 Hb_014361_030--Hb_000521_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.105585 0 0.129535 0.0569439 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.246544 0 0 0.120239 0.1831

CAGE analysis