Hb_003641_030

Information

Type -
Description -
Location Contig3641: 14531-15142
Sequence    

Annotation

kegg
ID rcu:RCOM_1970450
description hypothetical protein
nr
ID XP_012077108.1
description PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07532 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37478: 14495-15255
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003641_030 0.0 - - PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
2 Hb_000105_100 0.1081150117 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
3 Hb_019837_040 0.1644770247 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
4 Hb_000120_990 0.1784228197 - - PREDICTED: MATE efflux family protein 3, chloroplastic-like [Jatropha curcas]
5 Hb_014361_030 0.1822120186 - - hypothetical protein POPTR_0005s18860g [Populus trichocarpa]
6 Hb_000390_190 0.1842515211 - - ATP binding protein, putative [Ricinus communis]
7 Hb_024468_030 0.185317866 desease resistance Gene Name: DUF3388 putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
8 Hb_000920_010 0.1927220744 - - hypothetical protein PRUPE_ppa013940mg [Prunus persica]
9 Hb_005563_010 0.1936997219 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
10 Hb_005144_120 0.198163377 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
11 Hb_000922_340 0.1987508571 - - PREDICTED: uncharacterized protein LOC105640368 [Jatropha curcas]
12 Hb_003209_010 0.2007858366 - - hypothetical protein POPTR_0010s16880g [Populus trichocarpa]
13 Hb_009178_070 0.2053726016 - - PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Jatropha curcas]
14 Hb_003647_020 0.2095591759 - - hypothetical protein JCGZ_25095 [Jatropha curcas]
15 Hb_169116_010 0.2122601524 - - PREDICTED: fatty-acid-binding protein 1 [Jatropha curcas]
16 Hb_000291_290 0.2131866024 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004689_040 0.2139035838 - - PREDICTED: uncharacterized protein LOC105648084 [Jatropha curcas]
18 Hb_000152_490 0.2145849307 - - PREDICTED: (6-4)DNA photolyase [Jatropha curcas]
19 Hb_000442_040 0.2160355196 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
20 Hb_014320_010 0.2179444392 - - PREDICTED: uncharacterized protein LOC105629932 [Jatropha curcas]

Gene co-expression network

sample Hb_003641_030 Hb_003641_030 Hb_000105_100 Hb_000105_100 Hb_003641_030--Hb_000105_100 Hb_019837_040 Hb_019837_040 Hb_003641_030--Hb_019837_040 Hb_000120_990 Hb_000120_990 Hb_003641_030--Hb_000120_990 Hb_014361_030 Hb_014361_030 Hb_003641_030--Hb_014361_030 Hb_000390_190 Hb_000390_190 Hb_003641_030--Hb_000390_190 Hb_024468_030 Hb_024468_030 Hb_003641_030--Hb_024468_030 Hb_000105_100--Hb_019837_040 Hb_169116_010 Hb_169116_010 Hb_000105_100--Hb_169116_010 Hb_000442_040 Hb_000442_040 Hb_000105_100--Hb_000442_040 Hb_003209_010 Hb_003209_010 Hb_000105_100--Hb_003209_010 Hb_000105_100--Hb_000120_990 Hb_019837_040--Hb_169116_010 Hb_004689_040 Hb_004689_040 Hb_019837_040--Hb_004689_040 Hb_009178_070 Hb_009178_070 Hb_019837_040--Hb_009178_070 Hb_001488_030 Hb_001488_030 Hb_019837_040--Hb_001488_030 Hb_000397_150 Hb_000397_150 Hb_000120_990--Hb_000397_150 Hb_009288_040 Hb_009288_040 Hb_000120_990--Hb_009288_040 Hb_000922_340 Hb_000922_340 Hb_000120_990--Hb_000922_340 Hb_000680_010 Hb_000680_010 Hb_000120_990--Hb_000680_010 Hb_001269_500 Hb_001269_500 Hb_000120_990--Hb_001269_500 Hb_003994_080 Hb_003994_080 Hb_000120_990--Hb_003994_080 Hb_014361_030--Hb_000120_990 Hb_000172_380 Hb_000172_380 Hb_014361_030--Hb_000172_380 Hb_014361_030--Hb_000390_190 Hb_000320_340 Hb_000320_340 Hb_014361_030--Hb_000320_340 Hb_000521_090 Hb_000521_090 Hb_014361_030--Hb_000521_090 Hb_004306_110 Hb_004306_110 Hb_000390_190--Hb_004306_110 Hb_000062_400 Hb_000062_400 Hb_000390_190--Hb_000062_400 Hb_000860_060 Hb_000860_060 Hb_000390_190--Hb_000860_060 Hb_000189_480 Hb_000189_480 Hb_000390_190--Hb_000189_480 Hb_001976_030 Hb_001976_030 Hb_000390_190--Hb_001976_030 Hb_000920_310 Hb_000920_310 Hb_000390_190--Hb_000920_310 Hb_001793_020 Hb_001793_020 Hb_024468_030--Hb_001793_020 Hb_005690_030 Hb_005690_030 Hb_024468_030--Hb_005690_030 Hb_002324_090 Hb_002324_090 Hb_024468_030--Hb_002324_090 Hb_001728_110 Hb_001728_110 Hb_024468_030--Hb_001728_110 Hb_000318_300 Hb_000318_300 Hb_024468_030--Hb_000318_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.5398 3.61344 83.2027 81.744 4.4317 14.7073
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.8114 10.9436 12.7067 2.05196 95.4518

CAGE analysis