Hb_002324_090

Information

Type -
Description -
Location Contig2324: 68357-71639
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_012072604.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KKN1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07895 PE=4 SV=1
Gene Ontology
ID GO:0016301
description lrr receptor-like serine threonine-protein kinase gso1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002324_090 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
2 Hb_001405_090 0.1612720769 - - PREDICTED: photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Jatropha curcas]
3 Hb_000442_070 0.1682065916 - - PREDICTED: uncharacterized protein LOC105645538 [Jatropha curcas]
4 Hb_000302_230 0.181758886 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004459_060 0.1836883203 - - 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus communis]
6 Hb_000393_040 0.1850640892 - - PREDICTED: uncharacterized protein LOC105128208 [Populus euphratica]
7 Hb_006620_070 0.1883788591 - - chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
8 Hb_002307_190 0.1972507791 - - PREDICTED: putative ion channel POLLUX-like 2 [Jatropha curcas]
9 Hb_011519_050 0.1983844254 - - hypothetical protein POPTR_0015s04810g [Populus trichocarpa]
10 Hb_006916_080 0.1999924411 - - PREDICTED: uncharacterized protein LOC105646751 [Jatropha curcas]
11 Hb_011114_020 0.2010180831 - - PREDICTED: 50S ribosomal protein L12-1, chloroplastic-like [Jatropha curcas]
12 Hb_007694_060 0.2038279233 - - PREDICTED: 50S ribosomal protein L35, chloroplastic [Jatropha curcas]
13 Hb_000146_030 0.2039551323 - - PREDICTED: 50S ribosomal protein L10, chloroplastic [Jatropha curcas]
14 Hb_001623_380 0.2050627309 - - PREDICTED: 7-hydroxymethyl chlorophyll a reductase, chloroplastic [Jatropha curcas]
15 Hb_002272_220 0.2067881201 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002477_020 0.2073998035 - - PREDICTED: uncharacterized protein LOC105631402 [Jatropha curcas]
17 Hb_001133_100 0.2098770006 - - PREDICTED: oligopeptide transporter 6-like [Jatropha curcas]
18 Hb_015175_040 0.2113733943 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000703_070 0.2139370066 - - PREDICTED: uncharacterized protein LOC105635704 isoform X1 [Jatropha curcas]
20 Hb_002071_030 0.21439243 - - PREDICTED: ACT domain-containing protein ACR11-like isoform X1 [Gossypium raimondii]

Gene co-expression network

sample Hb_002324_090 Hb_002324_090 Hb_001405_090 Hb_001405_090 Hb_002324_090--Hb_001405_090 Hb_000442_070 Hb_000442_070 Hb_002324_090--Hb_000442_070 Hb_000302_230 Hb_000302_230 Hb_002324_090--Hb_000302_230 Hb_004459_060 Hb_004459_060 Hb_002324_090--Hb_004459_060 Hb_000393_040 Hb_000393_040 Hb_002324_090--Hb_000393_040 Hb_006620_070 Hb_006620_070 Hb_002324_090--Hb_006620_070 Hb_001405_090--Hb_006620_070 Hb_001405_090--Hb_004459_060 Hb_001405_090--Hb_000442_070 Hb_007694_060 Hb_007694_060 Hb_001405_090--Hb_007694_060 Hb_011114_020 Hb_011114_020 Hb_001405_090--Hb_011114_020 Hb_000206_170 Hb_000206_170 Hb_001405_090--Hb_000206_170 Hb_010557_010 Hb_010557_010 Hb_000442_070--Hb_010557_010 Hb_005563_040 Hb_005563_040 Hb_000442_070--Hb_005563_040 Hb_000442_070--Hb_011114_020 Hb_002411_100 Hb_002411_100 Hb_000442_070--Hb_002411_100 Hb_000442_070--Hb_006620_070 Hb_003948_020 Hb_003948_020 Hb_000442_070--Hb_003948_020 Hb_000009_510 Hb_000009_510 Hb_000302_230--Hb_000009_510 Hb_000302_230--Hb_000393_040 Hb_006583_030 Hb_006583_030 Hb_000302_230--Hb_006583_030 Hb_006681_020 Hb_006681_020 Hb_000302_230--Hb_006681_020 Hb_137216_010 Hb_137216_010 Hb_000302_230--Hb_137216_010 Hb_003680_060 Hb_003680_060 Hb_000302_230--Hb_003680_060 Hb_004459_060--Hb_006620_070 Hb_004459_060--Hb_007694_060 Hb_000146_030 Hb_000146_030 Hb_004459_060--Hb_000146_030 Hb_004459_060--Hb_002411_100 Hb_012545_040 Hb_012545_040 Hb_004459_060--Hb_012545_040 Hb_000005_130 Hb_000005_130 Hb_004459_060--Hb_000005_130 Hb_000393_040--Hb_137216_010 Hb_177281_010 Hb_177281_010 Hb_000393_040--Hb_177281_010 Hb_000393_040--Hb_000009_510 Hb_001135_070 Hb_001135_070 Hb_000393_040--Hb_001135_070 Hb_000974_040 Hb_000974_040 Hb_000393_040--Hb_000974_040 Hb_006620_070--Hb_007694_060 Hb_006620_070--Hb_000005_130 Hb_006620_070--Hb_002411_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0121662 0.0097311 0.133001 0.0360189 0 0.00858568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0222963 0.0350869 0 0 0.185438

CAGE analysis