Hb_000105_100

Information

Type -
Description -
Location Contig105: 145137-149647
Sequence    

Annotation

kegg
ID rcu:RCOM_1382790
description pyruvate kinase, putative (EC:2.7.1.40)
nr
ID XP_012093183.1
description PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
swissprot
ID Q43117
description Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1
trembl
ID A0A067LJT0
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_16387 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate kinase isozyme chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01697: 145024-149552
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000105_100 0.0 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
2 Hb_003641_030 0.1081150117 - - PREDICTED: uncharacterized protein LOC105638015 [Jatropha curcas]
3 Hb_019837_040 0.1434609763 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
4 Hb_169116_010 0.1466545327 - - PREDICTED: fatty-acid-binding protein 1 [Jatropha curcas]
5 Hb_000442_040 0.1598989612 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
6 Hb_003209_010 0.1641596962 - - hypothetical protein POPTR_0010s16880g [Populus trichocarpa]
7 Hb_000120_990 0.1679595218 - - PREDICTED: MATE efflux family protein 3, chloroplastic-like [Jatropha curcas]
8 Hb_009178_070 0.1689335924 - - PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Jatropha curcas]
9 Hb_005563_010 0.1786858833 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
10 Hb_000922_340 0.1814058424 - - PREDICTED: uncharacterized protein LOC105640368 [Jatropha curcas]
11 Hb_005144_120 0.182531976 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
12 Hb_004689_040 0.1893593717 - - PREDICTED: uncharacterized protein LOC105648084 [Jatropha curcas]
13 Hb_000920_010 0.1900441761 - - hypothetical protein PRUPE_ppa013940mg [Prunus persica]
14 Hb_012653_030 0.1910966392 - - PREDICTED: probable ribose-5-phosphate isomerase 4, chloroplastic isoform X2 [Jatropha curcas]
15 Hb_011004_050 0.1941574611 - - PREDICTED: kinesin-13A [Jatropha curcas]
16 Hb_014320_010 0.1991314453 - - PREDICTED: uncharacterized protein LOC105629932 [Jatropha curcas]
17 Hb_017895_060 0.19968464 - - PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Jatropha curcas]
18 Hb_014361_030 0.2010797456 - - hypothetical protein POPTR_0005s18860g [Populus trichocarpa]
19 Hb_003549_140 0.2026664392 - - Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative [Ricinus communis]
20 Hb_160256_010 0.2028578686 - - -

Gene co-expression network

sample Hb_000105_100 Hb_000105_100 Hb_003641_030 Hb_003641_030 Hb_000105_100--Hb_003641_030 Hb_019837_040 Hb_019837_040 Hb_000105_100--Hb_019837_040 Hb_169116_010 Hb_169116_010 Hb_000105_100--Hb_169116_010 Hb_000442_040 Hb_000442_040 Hb_000105_100--Hb_000442_040 Hb_003209_010 Hb_003209_010 Hb_000105_100--Hb_003209_010 Hb_000120_990 Hb_000120_990 Hb_000105_100--Hb_000120_990 Hb_003641_030--Hb_019837_040 Hb_003641_030--Hb_000120_990 Hb_014361_030 Hb_014361_030 Hb_003641_030--Hb_014361_030 Hb_000390_190 Hb_000390_190 Hb_003641_030--Hb_000390_190 Hb_024468_030 Hb_024468_030 Hb_003641_030--Hb_024468_030 Hb_019837_040--Hb_169116_010 Hb_004689_040 Hb_004689_040 Hb_019837_040--Hb_004689_040 Hb_009178_070 Hb_009178_070 Hb_019837_040--Hb_009178_070 Hb_001488_030 Hb_001488_030 Hb_019837_040--Hb_001488_030 Hb_169116_010--Hb_001488_030 Hb_000005_180 Hb_000005_180 Hb_169116_010--Hb_000005_180 Hb_169116_010--Hb_000442_040 Hb_009851_010 Hb_009851_010 Hb_169116_010--Hb_009851_010 Hb_160256_010 Hb_160256_010 Hb_000442_040--Hb_160256_010 Hb_005217_030 Hb_005217_030 Hb_000442_040--Hb_005217_030 Hb_021732_010 Hb_021732_010 Hb_000442_040--Hb_021732_010 Hb_000181_060 Hb_000181_060 Hb_000442_040--Hb_000181_060 Hb_000442_040--Hb_001488_030 Hb_000331_420 Hb_000331_420 Hb_000442_040--Hb_000331_420 Hb_000922_340 Hb_000922_340 Hb_003209_010--Hb_000922_340 Hb_005914_050 Hb_005914_050 Hb_003209_010--Hb_005914_050 Hb_005333_200 Hb_005333_200 Hb_003209_010--Hb_005333_200 Hb_003209_010--Hb_009178_070 Hb_004117_040 Hb_004117_040 Hb_003209_010--Hb_004117_040 Hb_002150_130 Hb_002150_130 Hb_003209_010--Hb_002150_130 Hb_000397_150 Hb_000397_150 Hb_000120_990--Hb_000397_150 Hb_009288_040 Hb_009288_040 Hb_000120_990--Hb_009288_040 Hb_000120_990--Hb_000922_340 Hb_000680_010 Hb_000680_010 Hb_000120_990--Hb_000680_010 Hb_001269_500 Hb_001269_500 Hb_000120_990--Hb_001269_500 Hb_003994_080 Hb_003994_080 Hb_000120_990--Hb_003994_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.39836 0.660413 21.9164 13.715 1.6218 1.75868
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.24342 1.95997 4.13709 0.90662 16.8242

CAGE analysis