Hb_101733_040

Information

Type -
Description -
Location Contig101733: 16478-17938
Sequence    

Annotation

kegg
ID pop:POPTR_0008s18810g
description POPTRDRAFT_565131; hypothetical protein
nr
ID AIU56749.1
description cytochrome P450 CYP71B63v2 [Populus trichocarpa]
swissprot
ID Q9LIP4
description Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=3 SV=1
trembl
ID A0A097PUF9
description Cytochrome P450 CYP71B63v2 OS=Populus trichocarpa PE=2 SV=1
Gene Ontology
ID GO:0016709
description cytochrome family subfamily polypeptide

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101733_040 0.0 - - cytochrome P450 CYP71B63v2 [Populus trichocarpa]
2 Hb_000215_350 0.188413042 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
3 Hb_002639_100 0.2003047017 - - dehydrin [Hevea brasiliensis]
4 Hb_001268_120 0.2047335782 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000671_170 0.2085294598 - - kinase, putative [Ricinus communis]
6 Hb_001439_230 0.2091928261 - - PREDICTED: cystathionine gamma-synthase 1, chloroplastic [Jatropha curcas]
7 Hb_006846_020 0.213642533 - - PREDICTED: uncharacterized protein LOC105648685 [Jatropha curcas]
8 Hb_000671_160 0.2177296892 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
9 Hb_014068_050 0.2243102515 - - PREDICTED: probable serine/threonine-protein kinase RLCKVII [Jatropha curcas]
10 Hb_000038_040 0.2256883209 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
11 Hb_000318_480 0.22730273 - - PREDICTED: RING-H2 finger protein ATL65 [Jatropha curcas]
12 Hb_088753_010 0.2289986135 - - PREDICTED: copper amine oxidase 1-like [Vitis vinifera]
13 Hb_002572_050 0.2297500653 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
14 Hb_005496_180 0.2307321041 - - PREDICTED: U-box domain-containing protein 4-like [Jatropha curcas]
15 Hb_004208_140 0.2311801631 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
16 Hb_000270_350 0.2322309056 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
17 Hb_171900_020 0.2345666794 - - PREDICTED: uncharacterized protein LOC105643207 [Jatropha curcas]
18 Hb_004774_020 0.2346695716 - - PREDICTED: PRA1 family protein B4-like [Camelina sativa]
19 Hb_001959_120 0.2360361403 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
20 Hb_002301_170 0.2368549839 - - MAC/Perforin domain-containing protein [Theobroma cacao]

Gene co-expression network

sample Hb_101733_040 Hb_101733_040 Hb_000215_350 Hb_000215_350 Hb_101733_040--Hb_000215_350 Hb_002639_100 Hb_002639_100 Hb_101733_040--Hb_002639_100 Hb_001268_120 Hb_001268_120 Hb_101733_040--Hb_001268_120 Hb_000671_170 Hb_000671_170 Hb_101733_040--Hb_000671_170 Hb_001439_230 Hb_001439_230 Hb_101733_040--Hb_001439_230 Hb_006846_020 Hb_006846_020 Hb_101733_040--Hb_006846_020 Hb_002572_050 Hb_002572_050 Hb_000215_350--Hb_002572_050 Hb_000318_480 Hb_000318_480 Hb_000215_350--Hb_000318_480 Hb_005496_180 Hb_005496_180 Hb_000215_350--Hb_005496_180 Hb_003411_030 Hb_003411_030 Hb_000215_350--Hb_003411_030 Hb_000953_050 Hb_000953_050 Hb_000215_350--Hb_000953_050 Hb_000056_170 Hb_000056_170 Hb_000215_350--Hb_000056_170 Hb_006935_010 Hb_006935_010 Hb_002639_100--Hb_006935_010 Hb_002053_130 Hb_002053_130 Hb_002639_100--Hb_002053_130 Hb_012107_010 Hb_012107_010 Hb_002639_100--Hb_012107_010 Hb_002639_100--Hb_002572_050 Hb_000038_040 Hb_000038_040 Hb_002639_100--Hb_000038_040 Hb_003747_210 Hb_003747_210 Hb_002639_100--Hb_003747_210 Hb_000699_230 Hb_000699_230 Hb_001268_120--Hb_000699_230 Hb_002217_220 Hb_002217_220 Hb_001268_120--Hb_002217_220 Hb_082741_010 Hb_082741_010 Hb_001268_120--Hb_082741_010 Hb_000120_820 Hb_000120_820 Hb_001268_120--Hb_000120_820 Hb_000490_060 Hb_000490_060 Hb_001268_120--Hb_000490_060 Hb_010407_170 Hb_010407_170 Hb_001268_120--Hb_010407_170 Hb_000868_100 Hb_000868_100 Hb_000671_170--Hb_000868_100 Hb_000671_160 Hb_000671_160 Hb_000671_170--Hb_000671_160 Hb_000672_150 Hb_000672_150 Hb_000671_170--Hb_000672_150 Hb_001959_120 Hb_001959_120 Hb_000671_170--Hb_001959_120 Hb_001113_030 Hb_001113_030 Hb_000671_170--Hb_001113_030 Hb_008173_030 Hb_008173_030 Hb_000671_170--Hb_008173_030 Hb_004774_020 Hb_004774_020 Hb_001439_230--Hb_004774_020 Hb_002301_170 Hb_002301_170 Hb_001439_230--Hb_002301_170 Hb_000000_230 Hb_000000_230 Hb_001439_230--Hb_000000_230 Hb_006970_050 Hb_006970_050 Hb_001439_230--Hb_006970_050 Hb_000086_420 Hb_000086_420 Hb_001439_230--Hb_000086_420 Hb_001439_230--Hb_000490_060 Hb_006846_020--Hb_000038_040 Hb_002477_120 Hb_002477_120 Hb_006846_020--Hb_002477_120 Hb_007007_080 Hb_007007_080 Hb_006846_020--Hb_007007_080 Hb_000107_440 Hb_000107_440 Hb_006846_020--Hb_000107_440 Hb_004208_140 Hb_004208_140 Hb_006846_020--Hb_004208_140 Hb_003207_100 Hb_003207_100 Hb_006846_020--Hb_003207_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0815811 0.493003 0.163568 0.20216 0.0301591 0.0409599
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.306995 0.104397 0.245479 0.0580992

CAGE analysis