Hb_082741_010

Information

Type -
Description -
Location Contig82741: 87-2399
Sequence    

Annotation

kegg
ID vvi:100247818
description uncharacterized LOC100247818
nr
ID XP_012092158.1
description PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JC60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21868 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59741: 604-770 , PASA_asmbl_59742: 1445-1653 , PASA_asmbl_59743: 1689-2328
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082741_010 0.0 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
2 Hb_006916_110 0.0976364969 - - PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 isoform X2 [Jatropha curcas]
3 Hb_000345_320 0.1010458928 transcription factor TF Family: MYB-related PREDICTED: protein ALWAYS EARLY 2-like isoform X1 [Jatropha curcas]
4 Hb_012760_040 0.1012775733 - - PREDICTED: aconitate hydratase 1 [Jatropha curcas]
5 Hb_042474_010 0.1030903326 - - PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Jatropha curcas]
6 Hb_000347_450 0.1127071153 - - PREDICTED: tRNA(His) guanylyltransferase 1-like isoform X2 [Jatropha curcas]
7 Hb_000209_100 0.1129359414 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X2 [Jatropha curcas]
8 Hb_025336_020 0.1130103531 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
9 Hb_006501_160 0.1155547615 - - PREDICTED: hexokinase-1-like [Jatropha curcas]
10 Hb_011224_160 0.1158076218 transcription factor, rubber biosynthesis TF Family: HSF, Gene Name: Farnesyl diphosphate synthase PREDICTED: heat stress transcription factor A-5 [Jatropha curcas]
11 Hb_001726_110 0.1169198556 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 19 [Jatropha curcas]
12 Hb_000088_270 0.1175134147 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
13 Hb_000190_090 0.1194768466 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
14 Hb_000144_120 0.1236687858 - - WD-repeat protein, putative [Ricinus communis]
15 Hb_009732_020 0.1243287772 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
16 Hb_001268_120 0.1266422974 - - conserved hypothetical protein [Ricinus communis]
17 Hb_012022_080 0.1274923375 - - ubiquitin-protein ligase, putative [Ricinus communis]
18 Hb_001214_090 0.1287050528 - - PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Jatropha curcas]
19 Hb_000979_220 0.1303888804 - - PREDICTED: uncharacterized protein LOC105634085 isoform X1 [Jatropha curcas]
20 Hb_050847_050 0.1306541382 - - PREDICTED: uncharacterized protein LOC105649140 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_082741_010 Hb_082741_010 Hb_006916_110 Hb_006916_110 Hb_082741_010--Hb_006916_110 Hb_000345_320 Hb_000345_320 Hb_082741_010--Hb_000345_320 Hb_012760_040 Hb_012760_040 Hb_082741_010--Hb_012760_040 Hb_042474_010 Hb_042474_010 Hb_082741_010--Hb_042474_010 Hb_000347_450 Hb_000347_450 Hb_082741_010--Hb_000347_450 Hb_000209_100 Hb_000209_100 Hb_082741_010--Hb_000209_100 Hb_012325_010 Hb_012325_010 Hb_006916_110--Hb_012325_010 Hb_006916_110--Hb_042474_010 Hb_021576_010 Hb_021576_010 Hb_006916_110--Hb_021576_010 Hb_000342_050 Hb_000342_050 Hb_006916_110--Hb_000342_050 Hb_006916_110--Hb_000209_100 Hb_000190_090 Hb_000190_090 Hb_006916_110--Hb_000190_090 Hb_002276_040 Hb_002276_040 Hb_000345_320--Hb_002276_040 Hb_000345_320--Hb_000209_100 Hb_000345_320--Hb_006916_110 Hb_010872_050 Hb_010872_050 Hb_000345_320--Hb_010872_050 Hb_000144_120 Hb_000144_120 Hb_000345_320--Hb_000144_120 Hb_012760_040--Hb_042474_010 Hb_012760_040--Hb_000144_120 Hb_012760_040--Hb_000190_090 Hb_008226_070 Hb_008226_070 Hb_012760_040--Hb_008226_070 Hb_012760_040--Hb_006916_110 Hb_042474_010--Hb_000190_090 Hb_004880_150 Hb_004880_150 Hb_042474_010--Hb_004880_150 Hb_001221_020 Hb_001221_020 Hb_042474_010--Hb_001221_020 Hb_016347_010 Hb_016347_010 Hb_042474_010--Hb_016347_010 Hb_011224_160 Hb_011224_160 Hb_000347_450--Hb_011224_160 Hb_000088_270 Hb_000088_270 Hb_000347_450--Hb_000088_270 Hb_000684_040 Hb_000684_040 Hb_000347_450--Hb_000684_040 Hb_050847_050 Hb_050847_050 Hb_000347_450--Hb_050847_050 Hb_010775_040 Hb_010775_040 Hb_000347_450--Hb_010775_040 Hb_000183_090 Hb_000183_090 Hb_000347_450--Hb_000183_090 Hb_001642_070 Hb_001642_070 Hb_000209_100--Hb_001642_070 Hb_000535_050 Hb_000535_050 Hb_000209_100--Hb_000535_050 Hb_011925_020 Hb_011925_020 Hb_000209_100--Hb_011925_020 Hb_005074_020 Hb_005074_020 Hb_000209_100--Hb_005074_020 Hb_000209_100--Hb_016347_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.54783 6.3601 4.44875 4.48982 1.62513 1.32808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.83586 4.40368 3.01444 11.7028 3.79007

CAGE analysis