Hb_089100_040

Information

Type -
Description -
Location Contig89100: 9912-12044
Sequence    

Annotation

kegg
ID rcu:RCOM_0562800
description hypothetical protein
nr
ID XP_012078271.1
description PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
swissprot
ID Q28TS0
description Protein TolB OS=Jannaschia sp. (strain CCS1) GN=tolB PE=3 SV=1
trembl
ID A0A067K9P5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12114 PE=4 SV=1
Gene Ontology
ID GO:0005576
description dpp6 n-terminal domain-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089100_040 0.0 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
2 Hb_000189_470 0.1192242016 - - PREDICTED: DNA-damage-repair/toleration protein DRT102 [Jatropha curcas]
3 Hb_000866_370 0.1197376608 - - synaptotagmin, putative [Ricinus communis]
4 Hb_000362_090 0.121250155 - - PREDICTED: uncharacterized protein LOC105635736 isoform X1 [Jatropha curcas]
5 Hb_009897_010 0.1241312271 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
6 Hb_000216_020 0.1254398237 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
7 Hb_065500_030 0.1258391277 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Jatropha curcas]
8 Hb_000732_080 0.1281615001 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
9 Hb_000107_560 0.1288434523 - - glutamate receptor 3 plant, putative [Ricinus communis]
10 Hb_004162_120 0.130486071 - - PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Populus euphratica]
11 Hb_002005_120 0.1317235589 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
12 Hb_000010_350 0.1343958393 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
13 Hb_008226_100 0.1390694166 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
14 Hb_020178_050 0.1400075005 desease resistance Gene Name: RPW8 PREDICTED: probable disease resistance protein At4g33300 [Jatropha curcas]
15 Hb_000538_190 0.1412643175 - - PREDICTED: protein DJ-1 homolog D [Jatropha curcas]
16 Hb_009193_110 0.1462752402 - - PREDICTED: wall-associated receptor kinase-like 1 isoform X1 [Jatropha curcas]
17 Hb_002233_020 0.146813106 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
18 Hb_001699_150 0.151191634 - - hypothetical protein POPTR_0009s13450g [Populus trichocarpa]
19 Hb_001369_770 0.1513000745 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
20 Hb_004976_040 0.1534473967 - - PREDICTED: protein HASTY 1 [Jatropha curcas]

Gene co-expression network

sample Hb_089100_040 Hb_089100_040 Hb_000189_470 Hb_000189_470 Hb_089100_040--Hb_000189_470 Hb_000866_370 Hb_000866_370 Hb_089100_040--Hb_000866_370 Hb_000362_090 Hb_000362_090 Hb_089100_040--Hb_000362_090 Hb_009897_010 Hb_009897_010 Hb_089100_040--Hb_009897_010 Hb_000216_020 Hb_000216_020 Hb_089100_040--Hb_000216_020 Hb_065500_030 Hb_065500_030 Hb_089100_040--Hb_065500_030 Hb_122273_020 Hb_122273_020 Hb_000189_470--Hb_122273_020 Hb_002918_320 Hb_002918_320 Hb_000189_470--Hb_002918_320 Hb_002005_120 Hb_002005_120 Hb_000189_470--Hb_002005_120 Hb_001699_150 Hb_001699_150 Hb_000189_470--Hb_001699_150 Hb_000413_250 Hb_000413_250 Hb_000189_470--Hb_000413_250 Hb_117895_010 Hb_117895_010 Hb_000866_370--Hb_117895_010 Hb_000010_350 Hb_000010_350 Hb_000866_370--Hb_000010_350 Hb_002233_020 Hb_002233_020 Hb_000866_370--Hb_002233_020 Hb_011310_200 Hb_011310_200 Hb_000866_370--Hb_011310_200 Hb_000645_240 Hb_000645_240 Hb_000866_370--Hb_000645_240 Hb_009193_110 Hb_009193_110 Hb_000362_090--Hb_009193_110 Hb_004800_240 Hb_004800_240 Hb_000362_090--Hb_004800_240 Hb_000362_090--Hb_001699_150 Hb_004162_120 Hb_004162_120 Hb_000362_090--Hb_004162_120 Hb_148682_010 Hb_148682_010 Hb_000362_090--Hb_148682_010 Hb_003155_020 Hb_003155_020 Hb_009897_010--Hb_003155_020 Hb_009897_010--Hb_065500_030 Hb_009897_010--Hb_004162_120 Hb_011716_110 Hb_011716_110 Hb_009897_010--Hb_011716_110 Hb_000751_140 Hb_000751_140 Hb_009897_010--Hb_000751_140 Hb_000059_130 Hb_000059_130 Hb_000216_020--Hb_000059_130 Hb_003506_020 Hb_003506_020 Hb_000216_020--Hb_003506_020 Hb_000371_060 Hb_000371_060 Hb_000216_020--Hb_000371_060 Hb_000270_230 Hb_000270_230 Hb_000216_020--Hb_000270_230 Hb_008667_060 Hb_008667_060 Hb_000216_020--Hb_008667_060 Hb_000069_780 Hb_000069_780 Hb_000216_020--Hb_000069_780 Hb_065500_030--Hb_002005_120 Hb_011828_030 Hb_011828_030 Hb_065500_030--Hb_011828_030 Hb_065500_030--Hb_004162_120 Hb_000836_020 Hb_000836_020 Hb_065500_030--Hb_000836_020 Hb_000117_070 Hb_000117_070 Hb_065500_030--Hb_000117_070 Hb_000599_130 Hb_000599_130 Hb_065500_030--Hb_000599_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.9935 378.066 55.6552 109.983 91.113 69.2998
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.5655 6.8136 15.8638 147.761 83.9295

CAGE analysis