Hb_148682_010

Information

Type -
Description -
Location Contig148682: 5477-6118
Sequence    

Annotation

kegg
ID rcu:RCOM_1039710
description hypothetical protein
nr
ID XP_012068033.1
description PREDICTED: uncharacterized protein LOC105630720 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZ84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15899 PE=4 SV=1
Gene Ontology
ID GO:0016772
description tetratricopeptide repeat-like superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148682_010 0.0 - - PREDICTED: uncharacterized protein LOC105630720 [Jatropha curcas]
2 Hb_004126_080 0.0744084493 - - mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
3 Hb_001646_010 0.0988008377 - - hypothetical protein JCGZ_16333 [Jatropha curcas]
4 Hb_004800_240 0.0989726371 - - PREDICTED: vam6/Vps39-like protein [Jatropha curcas]
5 Hb_001195_020 0.1022989323 - - PREDICTED: ornithine carbamoyltransferase, chloroplastic [Jatropha curcas]
6 Hb_001699_150 0.1026557373 - - hypothetical protein POPTR_0009s13450g [Populus trichocarpa]
7 Hb_044486_040 0.1027739735 - - PREDICTED: ion channel CASTOR-like [Malus domestica]
8 Hb_007765_030 0.1044697901 - - PREDICTED: neutral ceramidase [Jatropha curcas]
9 Hb_004800_130 0.1081584546 - - hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
10 Hb_001414_040 0.1127796409 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha curcas]
11 Hb_001341_160 0.1135876443 - - PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Jatropha curcas]
12 Hb_002553_010 0.114121698 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 2-like [Populus euphratica]
13 Hb_002812_010 0.117222864 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
14 Hb_000622_280 0.1216769272 - - PREDICTED: uncharacterized protein At5g41620 isoform X1 [Jatropha curcas]
15 Hb_000834_230 0.1224305484 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
16 Hb_000133_090 0.1227462122 - - PREDICTED: uncharacterized protein LOC105629320 [Jatropha curcas]
17 Hb_005765_040 0.1245345578 - - transcription elongation factor s-II, putative [Ricinus communis]
18 Hb_159295_010 0.1252976132 - - hypothetical protein RCOM_1520720 [Ricinus communis]
19 Hb_001205_180 0.1263090127 - - hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
20 Hb_000856_300 0.1264489626 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]

Gene co-expression network

sample Hb_148682_010 Hb_148682_010 Hb_004126_080 Hb_004126_080 Hb_148682_010--Hb_004126_080 Hb_001646_010 Hb_001646_010 Hb_148682_010--Hb_001646_010 Hb_004800_240 Hb_004800_240 Hb_148682_010--Hb_004800_240 Hb_001195_020 Hb_001195_020 Hb_148682_010--Hb_001195_020 Hb_001699_150 Hb_001699_150 Hb_148682_010--Hb_001699_150 Hb_044486_040 Hb_044486_040 Hb_148682_010--Hb_044486_040 Hb_004126_080--Hb_001699_150 Hb_004126_080--Hb_004800_240 Hb_004126_080--Hb_001646_010 Hb_004126_080--Hb_001195_020 Hb_159295_010 Hb_159295_010 Hb_004126_080--Hb_159295_010 Hb_001646_010--Hb_044486_040 Hb_001341_160 Hb_001341_160 Hb_001646_010--Hb_001341_160 Hb_002374_210 Hb_002374_210 Hb_001646_010--Hb_002374_210 Hb_011202_030 Hb_011202_030 Hb_001646_010--Hb_011202_030 Hb_000010_420 Hb_000010_420 Hb_001646_010--Hb_000010_420 Hb_002005_030 Hb_002005_030 Hb_001646_010--Hb_002005_030 Hb_009193_110 Hb_009193_110 Hb_004800_240--Hb_009193_110 Hb_012038_010 Hb_012038_010 Hb_004800_240--Hb_012038_010 Hb_004800_240--Hb_001646_010 Hb_000334_130 Hb_000334_130 Hb_004800_240--Hb_000334_130 Hb_000953_040 Hb_000953_040 Hb_001195_020--Hb_000953_040 Hb_000866_090 Hb_000866_090 Hb_001195_020--Hb_000866_090 Hb_007765_030 Hb_007765_030 Hb_001195_020--Hb_007765_030 Hb_004800_130 Hb_004800_130 Hb_001195_020--Hb_004800_130 Hb_001799_190 Hb_001799_190 Hb_001699_150--Hb_001799_190 Hb_001675_010 Hb_001675_010 Hb_001699_150--Hb_001675_010 Hb_002016_060 Hb_002016_060 Hb_001699_150--Hb_002016_060 Hb_003544_070 Hb_003544_070 Hb_001699_150--Hb_003544_070 Hb_000243_130 Hb_000243_130 Hb_044486_040--Hb_000243_130 Hb_001221_090 Hb_001221_090 Hb_044486_040--Hb_001221_090 Hb_001904_030 Hb_001904_030 Hb_044486_040--Hb_001904_030 Hb_044486_040--Hb_011202_030 Hb_044486_040--Hb_001341_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0439 98.2129 54.3564 44.5953 46.9411 25.4082
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.797 11.8603 13.4524 87.6613 28.6699

CAGE analysis