Hb_001675_010

Information

Type -
Description -
Location Contig1675: 6481-9028
Sequence    

Annotation

kegg
ID mdm:103428465
description adenylyltransferase and sulfurtransferase MOCS3-like
nr
ID EMS53169.1
description hypothetical protein TRIUR3_09961 [Triticum urartu]
swissprot
ID -
description -
trembl
ID M7ZYH6
description Uncharacterized protein OS=Triticum urartu GN=TRIUR3_09961 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sulfite exporter family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15503: 7293-7564 , PASA_asmbl_15504: 7859-8441
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001675_010 0.0 - - hypothetical protein TRIUR3_09961 [Triticum urartu]
2 Hb_001699_150 0.102996166 - - hypothetical protein POPTR_0009s13450g [Populus trichocarpa]
3 Hb_002524_020 0.1068247026 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
4 Hb_001799_190 0.1084169104 - - PREDICTED: uncharacterized protein LOC105643221 [Jatropha curcas]
5 Hb_000371_060 0.1149431099 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
6 Hb_003544_070 0.115358949 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002781_010 0.1236392832 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
8 Hb_008667_060 0.1305347453 - - Magnesium and cobalt efflux protein corC, putative [Ricinus communis]
9 Hb_062416_010 0.1355695415 - - PREDICTED: UPF0202 protein At1g10490 [Jatropha curcas]
10 Hb_022250_150 0.1378350169 - - PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
11 Hb_000526_030 0.1385252705 - - PREDICTED: sister chromatid cohesion 1 protein 3-like [Jatropha curcas]
12 Hb_001195_350 0.1392888711 - - hypothetical protein JCGZ_04423 [Jatropha curcas]
13 Hb_004586_240 0.1403295657 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
14 Hb_003226_110 0.14097978 - - PREDICTED: exocyst complex component SEC15B [Jatropha curcas]
15 Hb_002874_130 0.1413623824 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
16 Hb_002016_060 0.1428798644 - - PREDICTED: uncharacterized protein LOC105642502 [Jatropha curcas]
17 Hb_001369_160 0.1463263785 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
18 Hb_000216_020 0.1478171466 - - PREDICTED: benzaldehyde dehydrogenase (NAD(+))-like [Jatropha curcas]
19 Hb_000676_040 0.1479929404 - - hypothetical protein POPTR_0007s13320g [Populus trichocarpa]
20 Hb_003894_100 0.1502805009 - - PREDICTED: AT-hook motif nuclear-localized protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_001675_010 Hb_001675_010 Hb_001699_150 Hb_001699_150 Hb_001675_010--Hb_001699_150 Hb_002524_020 Hb_002524_020 Hb_001675_010--Hb_002524_020 Hb_001799_190 Hb_001799_190 Hb_001675_010--Hb_001799_190 Hb_000371_060 Hb_000371_060 Hb_001675_010--Hb_000371_060 Hb_003544_070 Hb_003544_070 Hb_001675_010--Hb_003544_070 Hb_002781_010 Hb_002781_010 Hb_001675_010--Hb_002781_010 Hb_001699_150--Hb_001799_190 Hb_004126_080 Hb_004126_080 Hb_001699_150--Hb_004126_080 Hb_148682_010 Hb_148682_010 Hb_001699_150--Hb_148682_010 Hb_002016_060 Hb_002016_060 Hb_001699_150--Hb_002016_060 Hb_001699_150--Hb_003544_070 Hb_002524_020--Hb_000371_060 Hb_000676_040 Hb_000676_040 Hb_002524_020--Hb_000676_040 Hb_062416_010 Hb_062416_010 Hb_002524_020--Hb_062416_010 Hb_001414_040 Hb_001414_040 Hb_002524_020--Hb_001414_040 Hb_001268_310 Hb_001268_310 Hb_002524_020--Hb_001268_310 Hb_007765_030 Hb_007765_030 Hb_002524_020--Hb_007765_030 Hb_001799_190--Hb_001414_040 Hb_000395_220 Hb_000395_220 Hb_001799_190--Hb_000395_220 Hb_001322_180 Hb_001322_180 Hb_001799_190--Hb_001322_180 Hb_001799_190--Hb_002524_020 Hb_000371_060--Hb_001414_040 Hb_001259_120 Hb_001259_120 Hb_000371_060--Hb_001259_120 Hb_001195_350 Hb_001195_350 Hb_000371_060--Hb_001195_350 Hb_001257_100 Hb_001257_100 Hb_000371_060--Hb_001257_100 Hb_000059_130 Hb_000059_130 Hb_000371_060--Hb_000059_130 Hb_003544_070--Hb_000676_040 Hb_003544_070--Hb_002524_020 Hb_003544_070--Hb_001799_190 Hb_008667_060 Hb_008667_060 Hb_003544_070--Hb_008667_060 Hb_001122_010 Hb_001122_010 Hb_002781_010--Hb_001122_010 Hb_004586_240 Hb_004586_240 Hb_002781_010--Hb_004586_240 Hb_001625_010 Hb_001625_010 Hb_002781_010--Hb_001625_010 Hb_010270_010 Hb_010270_010 Hb_002781_010--Hb_010270_010 Hb_000840_070 Hb_000840_070 Hb_002781_010--Hb_000840_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.421411 1.28597 0.569018 0.693027 0.229302 0.25758
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.211934 0.214376 0.0447976 0.950434 0.199548

CAGE analysis