Hb_026337_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig26337: 5284-6046
Sequence    

Annotation

kegg
ID cic:CICLE_v10002052mg
description hypothetical protein
nr
ID XP_006433166.1
description hypothetical protein CICLE_v10002052mg [Citrus clementina]
swissprot
ID Q9FLB4
description Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana GN=At5g05400 PE=3 SV=1
trembl
ID V4TA02
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002052mg PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable disease resistance protein at4g27220-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026337_010 0.0 desease resistance Gene Name: NB-ARC hypothetical protein CICLE_v10002052mg [Citrus clementina]
2 Hb_141212_010 0.1550854378 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
3 Hb_063480_020 0.1742460987 - - unnamed protein product [Vitis vinifera]
4 Hb_000130_060 0.182280503 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
5 Hb_002370_030 0.1918840078 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
6 Hb_000679_200 0.1939962791 - - EIN3-binding F box protein 1 [Theobroma cacao]
7 Hb_001278_040 0.1947625 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
8 Hb_000836_550 0.1964858627 - - PREDICTED: reticulon-like protein B5 [Jatropha curcas]
9 Hb_054885_020 0.2004304146 - - -
10 Hb_000787_190 0.2049609924 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 15-like [Jatropha curcas]
11 Hb_000163_270 0.2064014124 - - PREDICTED: uncharacterized protein LOC105642512 [Jatropha curcas]
12 Hb_000406_110 0.2084701794 - - PREDICTED: transmembrane protein adipocyte-associated 1 [Jatropha curcas]
13 Hb_003371_230 0.2085940979 - - lactase-like b precursor [Scleropages formosus]
14 Hb_029977_050 0.2100455192 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA2 isoform X1 [Jatropha curcas]
15 Hb_181441_010 0.2120905756 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
16 Hb_004040_040 0.2129846634 desease resistance Gene Name: ABC_tran hypothetical protein POPTR_0006s07370g [Populus trichocarpa]
17 Hb_004837_050 0.2132947237 - - -
18 Hb_007426_140 0.2161063634 - - ornithine aminotransferase, putative [Ricinus communis]
19 Hb_001780_150 0.2162272693 - - ceramidase, putative [Ricinus communis]
20 Hb_000362_110 0.2172389858 - - PREDICTED: uncharacterized protein LOC104612097 isoform X2 [Nelumbo nucifera]

Gene co-expression network

sample Hb_026337_010 Hb_026337_010 Hb_141212_010 Hb_141212_010 Hb_026337_010--Hb_141212_010 Hb_063480_020 Hb_063480_020 Hb_026337_010--Hb_063480_020 Hb_000130_060 Hb_000130_060 Hb_026337_010--Hb_000130_060 Hb_002370_030 Hb_002370_030 Hb_026337_010--Hb_002370_030 Hb_000679_200 Hb_000679_200 Hb_026337_010--Hb_000679_200 Hb_001278_040 Hb_001278_040 Hb_026337_010--Hb_001278_040 Hb_141212_010--Hb_063480_020 Hb_054586_020 Hb_054586_020 Hb_141212_010--Hb_054586_020 Hb_054885_020 Hb_054885_020 Hb_141212_010--Hb_054885_020 Hb_097347_010 Hb_097347_010 Hb_141212_010--Hb_097347_010 Hb_049160_010 Hb_049160_010 Hb_141212_010--Hb_049160_010 Hb_063480_020--Hb_054885_020 Hb_000406_110 Hb_000406_110 Hb_063480_020--Hb_000406_110 Hb_000537_140 Hb_000537_140 Hb_063480_020--Hb_000537_140 Hb_006588_150 Hb_006588_150 Hb_063480_020--Hb_006588_150 Hb_002837_110 Hb_002837_110 Hb_063480_020--Hb_002837_110 Hb_063480_020--Hb_049160_010 Hb_000362_110 Hb_000362_110 Hb_000130_060--Hb_000362_110 Hb_000130_060--Hb_002370_030 Hb_003640_030 Hb_003640_030 Hb_000130_060--Hb_003640_030 Hb_004724_120 Hb_004724_120 Hb_000130_060--Hb_004724_120 Hb_007426_140 Hb_007426_140 Hb_000130_060--Hb_007426_140 Hb_004040_040 Hb_004040_040 Hb_002370_030--Hb_004040_040 Hb_150346_010 Hb_150346_010 Hb_002370_030--Hb_150346_010 Hb_062558_010 Hb_062558_010 Hb_002370_030--Hb_062558_010 Hb_027136_010 Hb_027136_010 Hb_002370_030--Hb_027136_010 Hb_148131_010 Hb_148131_010 Hb_002370_030--Hb_148131_010 Hb_000260_780 Hb_000260_780 Hb_002370_030--Hb_000260_780 Hb_060391_010 Hb_060391_010 Hb_000679_200--Hb_060391_010 Hb_000098_300 Hb_000098_300 Hb_000679_200--Hb_000098_300 Hb_007333_040 Hb_007333_040 Hb_000679_200--Hb_007333_040 Hb_000679_200--Hb_004724_120 Hb_003972_040 Hb_003972_040 Hb_000679_200--Hb_003972_040 Hb_080451_010 Hb_080451_010 Hb_001278_040--Hb_080451_010 Hb_029977_050 Hb_029977_050 Hb_001278_040--Hb_029977_050 Hb_000457_140 Hb_000457_140 Hb_001278_040--Hb_000457_140 Hb_004162_120 Hb_004162_120 Hb_001278_040--Hb_004162_120 Hb_011716_110 Hb_011716_110 Hb_001278_040--Hb_011716_110 Hb_003371_230 Hb_003371_230 Hb_001278_040--Hb_003371_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.334665 2.47673 0.446968 2.15079 0.498655 2.73703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.581361 0.195864 0.116244 2.313 0.772929

CAGE analysis