Hb_054586_020

Information

Type -
Description -
Location Contig54586: 6726-8968
Sequence    

Annotation

kegg
ID rcu:RCOM_1653250
description protein binding protein, putative
nr
ID XP_012089839.1
description PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067JIZ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01980 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_054586_020 0.0 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
2 Hb_001386_140 0.1325692949 - - PREDICTED: B2 protein [Jatropha curcas]
3 Hb_006132_100 0.1329800822 - - PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]
4 Hb_010565_010 0.1387687619 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
5 Hb_058702_010 0.1433310812 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
6 Hb_007333_040 0.1447907527 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
7 Hb_030328_010 0.1456386578 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
8 Hb_001034_070 0.1458663412 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_012180_040 0.1478351211 - - hypothetical protein VITISV_042517 [Vitis vinifera]
10 Hb_003633_040 0.1519587769 - - hypothetical protein B456_008G146200 [Gossypium raimondii]
11 Hb_115477_010 0.1521230855 - - Protein dom-3, putative [Ricinus communis]
12 Hb_003916_010 0.1536621233 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
13 Hb_012506_010 0.1536989502 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
14 Hb_000521_270 0.1540536457 - - PREDICTED: protein EMSY-LIKE 3 [Jatropha curcas]
15 Hb_001357_270 0.1541554412 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
16 Hb_000158_100 0.1547336199 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007026_040 0.1549447264 - - PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Eucalyptus grandis]
18 Hb_002110_040 0.1582322243 - - hypothetical protein AMTR_s00135p00074190 [Amborella trichopoda]
19 Hb_115107_010 0.1599878121 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
20 Hb_002067_120 0.1603814636 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_054586_020 Hb_054586_020 Hb_001386_140 Hb_001386_140 Hb_054586_020--Hb_001386_140 Hb_006132_100 Hb_006132_100 Hb_054586_020--Hb_006132_100 Hb_010565_010 Hb_010565_010 Hb_054586_020--Hb_010565_010 Hb_058702_010 Hb_058702_010 Hb_054586_020--Hb_058702_010 Hb_007333_040 Hb_007333_040 Hb_054586_020--Hb_007333_040 Hb_030328_010 Hb_030328_010 Hb_054586_020--Hb_030328_010 Hb_001386_140--Hb_010565_010 Hb_005023_030 Hb_005023_030 Hb_001386_140--Hb_005023_030 Hb_006663_090 Hb_006663_090 Hb_001386_140--Hb_006663_090 Hb_002067_120 Hb_002067_120 Hb_001386_140--Hb_002067_120 Hb_115477_010 Hb_115477_010 Hb_001386_140--Hb_115477_010 Hb_002027_270 Hb_002027_270 Hb_006132_100--Hb_002027_270 Hb_005494_020 Hb_005494_020 Hb_006132_100--Hb_005494_020 Hb_010180_040 Hb_010180_040 Hb_006132_100--Hb_010180_040 Hb_011716_020 Hb_011716_020 Hb_006132_100--Hb_011716_020 Hb_000600_070 Hb_000600_070 Hb_006132_100--Hb_000600_070 Hb_025012_010 Hb_025012_010 Hb_006132_100--Hb_025012_010 Hb_010565_010--Hb_002067_120 Hb_000606_080 Hb_000606_080 Hb_010565_010--Hb_000606_080 Hb_010565_010--Hb_005023_030 Hb_004934_070 Hb_004934_070 Hb_010565_010--Hb_004934_070 Hb_005714_130 Hb_005714_130 Hb_010565_010--Hb_005714_130 Hb_000160_220 Hb_000160_220 Hb_058702_010--Hb_000160_220 Hb_102269_010 Hb_102269_010 Hb_058702_010--Hb_102269_010 Hb_058702_010--Hb_005494_020 Hb_002960_160 Hb_002960_160 Hb_058702_010--Hb_002960_160 Hb_002903_080 Hb_002903_080 Hb_058702_010--Hb_002903_080 Hb_002301_260 Hb_002301_260 Hb_058702_010--Hb_002301_260 Hb_033385_010 Hb_033385_010 Hb_007333_040--Hb_033385_010 Hb_106415_010 Hb_106415_010 Hb_007333_040--Hb_106415_010 Hb_009119_020 Hb_009119_020 Hb_007333_040--Hb_009119_020 Hb_181328_010 Hb_181328_010 Hb_007333_040--Hb_181328_010 Hb_019053_010 Hb_019053_010 Hb_007333_040--Hb_019053_010 Hb_171788_010 Hb_171788_010 Hb_030328_010--Hb_171788_010 Hb_006723_020 Hb_006723_020 Hb_030328_010--Hb_006723_020 Hb_030328_010--Hb_001386_140 Hb_030328_010--Hb_010565_010 Hb_058381_010 Hb_058381_010 Hb_030328_010--Hb_058381_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.5651 49.4077 10.3657 58.474 31.2172 123.592
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.4165 14.3205 22.0313 46.8878 13.4899

CAGE analysis