Hb_006132_100

Information

Type -
Description -
Location Contig6132: 75478-77757
Sequence    

Annotation

kegg
ID rcu:RCOM_1615820
description hypothetical protein
nr
ID XP_012083367.1
description PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JXI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14383 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51116: 75417-79085 , PASA_asmbl_51117: 76606-76748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006132_100 0.0 - - PREDICTED: uncharacterized protein LOC105642968 [Jatropha curcas]
2 Hb_002027_270 0.0956059718 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
3 Hb_005494_020 0.0960862263 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
4 Hb_010180_040 0.0986784128 - - PREDICTED: prosaposin isoform X1 [Jatropha curcas]
5 Hb_011716_020 0.1085962142 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]
6 Hb_000600_070 0.1095133699 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
7 Hb_025012_010 0.1102473924 - - PREDICTED: importin-4 [Vitis vinifera]
8 Hb_001357_270 0.1117188533 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
9 Hb_080313_010 0.1139662285 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
10 Hb_058702_010 0.114734031 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
11 Hb_000866_030 0.1148702348 - - hypothetical protein RCOM_1615820 [Ricinus communis]
12 Hb_187739_020 0.1162360468 - - PREDICTED: B2 protein [Jatropha curcas]
13 Hb_001976_090 0.1164901719 - - PREDICTED: uncharacterized protein LOC105641696 [Jatropha curcas]
14 Hb_042487_010 0.1168504079 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 9-like [Jatropha curcas]
15 Hb_027028_020 0.1177920617 - - PREDICTED: uncharacterized protein LOC105633192 [Jatropha curcas]
16 Hb_001040_160 0.1180661504 - - glutaredoxin, grx, putative [Ricinus communis]
17 Hb_008714_020 0.1191230496 - - PREDICTED: GTP-binding protein SAR1A-like [Jatropha curcas]
18 Hb_029142_010 0.1218673644 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
19 Hb_012023_020 0.1223616333 - - hypothetical protein JCGZ_03076 [Jatropha curcas]
20 Hb_000347_130 0.1240519752 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]

Gene co-expression network

sample Hb_006132_100 Hb_006132_100 Hb_002027_270 Hb_002027_270 Hb_006132_100--Hb_002027_270 Hb_005494_020 Hb_005494_020 Hb_006132_100--Hb_005494_020 Hb_010180_040 Hb_010180_040 Hb_006132_100--Hb_010180_040 Hb_011716_020 Hb_011716_020 Hb_006132_100--Hb_011716_020 Hb_000600_070 Hb_000600_070 Hb_006132_100--Hb_000600_070 Hb_025012_010 Hb_025012_010 Hb_006132_100--Hb_025012_010 Hb_002027_270--Hb_025012_010 Hb_004619_050 Hb_004619_050 Hb_002027_270--Hb_004619_050 Hb_000567_050 Hb_000567_050 Hb_002027_270--Hb_000567_050 Hb_000031_220 Hb_000031_220 Hb_002027_270--Hb_000031_220 Hb_002027_270--Hb_000600_070 Hb_000429_120 Hb_000429_120 Hb_002027_270--Hb_000429_120 Hb_000567_010 Hb_000567_010 Hb_005494_020--Hb_000567_010 Hb_029142_010 Hb_029142_010 Hb_005494_020--Hb_029142_010 Hb_003935_030 Hb_003935_030 Hb_005494_020--Hb_003935_030 Hb_002960_160 Hb_002960_160 Hb_005494_020--Hb_002960_160 Hb_003428_070 Hb_003428_070 Hb_005494_020--Hb_003428_070 Hb_000347_130 Hb_000347_130 Hb_005494_020--Hb_000347_130 Hb_008714_020 Hb_008714_020 Hb_010180_040--Hb_008714_020 Hb_010180_040--Hb_005494_020 Hb_015763_030 Hb_015763_030 Hb_010180_040--Hb_015763_030 Hb_010180_040--Hb_000347_130 Hb_000046_450 Hb_000046_450 Hb_010180_040--Hb_000046_450 Hb_000160_220 Hb_000160_220 Hb_010180_040--Hb_000160_220 Hb_002028_170 Hb_002028_170 Hb_011716_020--Hb_002028_170 Hb_002974_060 Hb_002974_060 Hb_011716_020--Hb_002974_060 Hb_002600_140 Hb_002600_140 Hb_011716_020--Hb_002600_140 Hb_000023_190 Hb_000023_190 Hb_011716_020--Hb_000023_190 Hb_011716_020--Hb_002027_270 Hb_011716_020--Hb_000600_070 Hb_009535_020 Hb_009535_020 Hb_000600_070--Hb_009535_020 Hb_000743_040 Hb_000743_040 Hb_000600_070--Hb_000743_040 Hb_000600_070--Hb_000347_130 Hb_000600_070--Hb_000567_050 Hb_000600_070--Hb_003428_070 Hb_000600_070--Hb_000023_190 Hb_025012_010--Hb_004619_050 Hb_025012_010--Hb_000347_130 Hb_007904_220 Hb_007904_220 Hb_025012_010--Hb_007904_220 Hb_025012_010--Hb_003428_070 Hb_001040_160 Hb_001040_160 Hb_025012_010--Hb_001040_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
125.176 97.2344 14.0855 111.703 132.64 245.718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
91.1249 51.5192 51.4145 113.675 44.328

CAGE analysis