Hb_000567_010

Information

Type -
Description -
Location Contig567: 44430-52614
Sequence    

Annotation

kegg
ID rcu:RCOM_0904040
description hypothetical protein
nr
ID XP_012068502.1
description PREDICTED: uncharacterized protein LOC105631110 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LAE3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03180 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000567_010 0.0 - - PREDICTED: uncharacterized protein LOC105631110 [Jatropha curcas]
2 Hb_003124_130 0.0480031587 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
3 Hb_010193_050 0.0503919065 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005494_020 0.0508388484 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
5 Hb_147737_010 0.0597046448 - - PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Jatropha curcas]
6 Hb_000768_110 0.0605328711 - - PREDICTED: chromo domain-containing protein LHP1 isoform X1 [Jatropha curcas]
7 Hb_000331_190 0.0611517738 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
8 Hb_000510_310 0.0636813239 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like [Jatropha curcas]
9 Hb_000173_510 0.0642302465 - - PREDICTED: AP-5 complex subunit mu [Jatropha curcas]
10 Hb_000329_130 0.0649155965 - - beta-tubulin cofactor d, putative [Ricinus communis]
11 Hb_000347_130 0.0657410898 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]
12 Hb_002960_160 0.0658940546 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
13 Hb_003935_030 0.0664172149 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
14 Hb_029142_010 0.0673342192 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
15 Hb_000743_040 0.0689131088 - - ribosomal RNA methyltransferase, putative [Ricinus communis]
16 Hb_001028_070 0.0693851675 - - PREDICTED: WD repeat-containing protein 75 isoform X2 [Jatropha curcas]
17 Hb_125092_020 0.0700773062 - - PREDICTED: nucleolin 1-like isoform X1 [Jatropha curcas]
18 Hb_003428_070 0.0700932104 - - DEAD-box ATP-dependent RNA helicase 46 -like protein [Gossypium arboreum]
19 Hb_000531_090 0.0711674061 - - PREDICTED: transcription initiation factor IIF subunit alpha [Jatropha curcas]
20 Hb_001454_320 0.0724908943 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000567_010 Hb_000567_010 Hb_003124_130 Hb_003124_130 Hb_000567_010--Hb_003124_130 Hb_010193_050 Hb_010193_050 Hb_000567_010--Hb_010193_050 Hb_005494_020 Hb_005494_020 Hb_000567_010--Hb_005494_020 Hb_147737_010 Hb_147737_010 Hb_000567_010--Hb_147737_010 Hb_000768_110 Hb_000768_110 Hb_000567_010--Hb_000768_110 Hb_000331_190 Hb_000331_190 Hb_000567_010--Hb_000331_190 Hb_000796_190 Hb_000796_190 Hb_003124_130--Hb_000796_190 Hb_003124_130--Hb_147737_010 Hb_001454_320 Hb_001454_320 Hb_003124_130--Hb_001454_320 Hb_000158_130 Hb_000158_130 Hb_003124_130--Hb_000158_130 Hb_000160_290 Hb_000160_290 Hb_003124_130--Hb_000160_290 Hb_010193_050--Hb_003124_130 Hb_010193_050--Hb_000768_110 Hb_003605_130 Hb_003605_130 Hb_010193_050--Hb_003605_130 Hb_000329_130 Hb_000329_130 Hb_010193_050--Hb_000329_130 Hb_000645_120 Hb_000645_120 Hb_010193_050--Hb_000645_120 Hb_029142_010 Hb_029142_010 Hb_005494_020--Hb_029142_010 Hb_003935_030 Hb_003935_030 Hb_005494_020--Hb_003935_030 Hb_002960_160 Hb_002960_160 Hb_005494_020--Hb_002960_160 Hb_003428_070 Hb_003428_070 Hb_005494_020--Hb_003428_070 Hb_000347_130 Hb_000347_130 Hb_005494_020--Hb_000347_130 Hb_147737_010--Hb_000329_130 Hb_015026_050 Hb_015026_050 Hb_147737_010--Hb_015026_050 Hb_000343_210 Hb_000343_210 Hb_147737_010--Hb_000343_210 Hb_000531_090 Hb_000531_090 Hb_147737_010--Hb_000531_090 Hb_008159_020 Hb_008159_020 Hb_000768_110--Hb_008159_020 Hb_000160_040 Hb_000160_040 Hb_000768_110--Hb_000160_040 Hb_005914_060 Hb_005914_060 Hb_000768_110--Hb_005914_060 Hb_000173_510 Hb_000173_510 Hb_000768_110--Hb_000173_510 Hb_002652_040 Hb_002652_040 Hb_000331_190--Hb_002652_040 Hb_125092_020 Hb_125092_020 Hb_000331_190--Hb_125092_020 Hb_024990_010 Hb_024990_010 Hb_000331_190--Hb_024990_010 Hb_000035_040 Hb_000035_040 Hb_000331_190--Hb_000035_040 Hb_000340_160 Hb_000340_160 Hb_000331_190--Hb_000340_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.51012 5.46303 2.66234 3.05378 7.85897 9.94694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.46184 3.02366 2.99825 4.79659 2.66167

CAGE analysis