Hb_058381_010

Information

Type -
Description -
Location Contig58381: 170-559
Sequence    

Annotation

kegg
ID cmo:103502747
description uncharacterized LOC103502747
nr
ID KDP32355.1
description hypothetical protein JCGZ_13280 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJB9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49894: 163-667
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058381_010 0.0 - - hypothetical protein JCGZ_13280 [Jatropha curcas]
2 Hb_083043_010 0.1349227832 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
3 Hb_187739_020 0.1349269383 - - PREDICTED: B2 protein [Jatropha curcas]
4 Hb_030328_010 0.1398233659 - - hypothetical protein CICLE_v10015936mg [Citrus clementina]
5 Hb_000159_110 0.1445873439 - - PREDICTED: thioredoxin-like protein YLS8 isoform X2 [Malus domestica]
6 Hb_173178_020 0.1472184061 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X1 [Jatropha curcas]
7 Hb_015354_010 0.1479358519 - - PREDICTED: B2 protein [Jatropha curcas]
8 Hb_156144_010 0.1490996413 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
9 Hb_008714_020 0.1539584371 - - PREDICTED: GTP-binding protein SAR1A-like [Jatropha curcas]
10 Hb_019282_010 0.1541208125 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
11 Hb_010180_040 0.1554006026 - - PREDICTED: prosaposin isoform X1 [Jatropha curcas]
12 Hb_003376_070 0.1557695515 - - hypothetical protein B456_009G419800 [Gossypium raimondii]
13 Hb_003656_140 0.1559394479 - - PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]
14 Hb_006913_040 0.1565902648 - - PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Jatropha curcas]
15 Hb_171788_010 0.1566909566 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
16 Hb_000866_030 0.1580615505 - - hypothetical protein RCOM_1615820 [Ricinus communis]
17 Hb_003711_040 0.1585560649 - - PREDICTED: UBX domain-containing protein 4 [Jatropha curcas]
18 Hb_003299_090 0.1591790302 - - hypothetical protein PRUPE_ppa011647mg [Prunus persica]
19 Hb_000977_310 0.1597683288 - - PREDICTED: gamma-tubulin complex component 2 isoform X4 [Jatropha curcas]
20 Hb_000732_020 0.160446511 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_058381_010 Hb_058381_010 Hb_083043_010 Hb_083043_010 Hb_058381_010--Hb_083043_010 Hb_187739_020 Hb_187739_020 Hb_058381_010--Hb_187739_020 Hb_030328_010 Hb_030328_010 Hb_058381_010--Hb_030328_010 Hb_000159_110 Hb_000159_110 Hb_058381_010--Hb_000159_110 Hb_173178_020 Hb_173178_020 Hb_058381_010--Hb_173178_020 Hb_015354_010 Hb_015354_010 Hb_058381_010--Hb_015354_010 Hb_003711_040 Hb_003711_040 Hb_083043_010--Hb_003711_040 Hb_003581_020 Hb_003581_020 Hb_083043_010--Hb_003581_020 Hb_002811_120 Hb_002811_120 Hb_083043_010--Hb_002811_120 Hb_004881_050 Hb_004881_050 Hb_083043_010--Hb_004881_050 Hb_006114_020 Hb_006114_020 Hb_083043_010--Hb_006114_020 Hb_150204_010 Hb_150204_010 Hb_083043_010--Hb_150204_010 Hb_000866_030 Hb_000866_030 Hb_187739_020--Hb_000866_030 Hb_002982_040 Hb_002982_040 Hb_187739_020--Hb_002982_040 Hb_003656_140 Hb_003656_140 Hb_187739_020--Hb_003656_140 Hb_000160_220 Hb_000160_220 Hb_187739_020--Hb_000160_220 Hb_031862_180 Hb_031862_180 Hb_187739_020--Hb_031862_180 Hb_008714_020 Hb_008714_020 Hb_187739_020--Hb_008714_020 Hb_171788_010 Hb_171788_010 Hb_030328_010--Hb_171788_010 Hb_006723_020 Hb_006723_020 Hb_030328_010--Hb_006723_020 Hb_001386_140 Hb_001386_140 Hb_030328_010--Hb_001386_140 Hb_010565_010 Hb_010565_010 Hb_030328_010--Hb_010565_010 Hb_054586_020 Hb_054586_020 Hb_030328_010--Hb_054586_020 Hb_002411_130 Hb_002411_130 Hb_000159_110--Hb_002411_130 Hb_000159_110--Hb_083043_010 Hb_009119_030 Hb_009119_030 Hb_000159_110--Hb_009119_030 Hb_000159_110--Hb_000160_220 Hb_001752_040 Hb_001752_040 Hb_000159_110--Hb_001752_040 Hb_058702_010 Hb_058702_010 Hb_000159_110--Hb_058702_010 Hb_001616_090 Hb_001616_090 Hb_173178_020--Hb_001616_090 Hb_031091_010 Hb_031091_010 Hb_173178_020--Hb_031091_010 Hb_003716_020 Hb_003716_020 Hb_173178_020--Hb_003716_020 Hb_000352_090 Hb_000352_090 Hb_173178_020--Hb_000352_090 Hb_009411_020 Hb_009411_020 Hb_173178_020--Hb_009411_020 Hb_173178_020--Hb_008714_020 Hb_001052_040 Hb_001052_040 Hb_015354_010--Hb_001052_040 Hb_003038_220 Hb_003038_220 Hb_015354_010--Hb_003038_220 Hb_015354_010--Hb_173178_020 Hb_000152_670 Hb_000152_670 Hb_015354_010--Hb_000152_670 Hb_142751_010 Hb_142751_010 Hb_015354_010--Hb_142751_010 Hb_002742_080 Hb_002742_080 Hb_015354_010--Hb_002742_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
96.8179 105.353 19.3094 95.1731 137.565 295.935
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
99.8408 50.1465 32.1059 38.2396 8.0204

CAGE analysis