Hb_031862_180

Information

Type -
Description -
Location Contig31862: 201802-203019
Sequence    

Annotation

kegg
ID pop:POPTR_0007s03500g
description POPTRDRAFT_216941; hypothetical protein
nr
ID XP_012085488.1
description PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K343
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17823 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031862_180 0.0 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
2 Hb_002716_140 0.0823456 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
3 Hb_007643_050 0.0835854305 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_187739_020 0.0858431433 - - PREDICTED: B2 protein [Jatropha curcas]
5 Hb_000364_080 0.0876862644 - - PREDICTED: OTU domain-containing protein 3 isoform X1 [Jatropha curcas]
6 Hb_008695_120 0.0917729406 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
7 Hb_002067_020 0.0944285504 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000160_220 0.0967056772 - - PREDICTED: protein AAR2 homolog isoform X1 [Jatropha curcas]
9 Hb_002942_160 0.0968125994 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
10 Hb_031091_010 0.0972754848 - - crooked neck protein, putative [Ricinus communis]
11 Hb_002107_160 0.0973145707 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
12 Hb_000364_060 0.0975241666 - - JHL03K20.4 [Jatropha curcas]
13 Hb_001158_220 0.0979352215 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
14 Hb_000316_030 0.0986226216 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000956_030 0.0988789056 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 19-like [Jatropha curcas]
16 Hb_003434_060 0.0989445755 - - PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X1 [Jatropha curcas]
17 Hb_000523_090 0.1002766811 - - PREDICTED: protein DJ-1 homolog D-like [Populus euphratica]
18 Hb_003363_010 0.1011237083 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003581_120 0.1016228511 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
20 Hb_033312_140 0.1021831617 - - RNA and export factor-binding family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_031862_180 Hb_031862_180 Hb_002716_140 Hb_002716_140 Hb_031862_180--Hb_002716_140 Hb_007643_050 Hb_007643_050 Hb_031862_180--Hb_007643_050 Hb_187739_020 Hb_187739_020 Hb_031862_180--Hb_187739_020 Hb_000364_080 Hb_000364_080 Hb_031862_180--Hb_000364_080 Hb_008695_120 Hb_008695_120 Hb_031862_180--Hb_008695_120 Hb_002067_020 Hb_002067_020 Hb_031862_180--Hb_002067_020 Hb_031091_010 Hb_031091_010 Hb_002716_140--Hb_031091_010 Hb_003581_120 Hb_003581_120 Hb_002716_140--Hb_003581_120 Hb_000034_050 Hb_000034_050 Hb_002716_140--Hb_000034_050 Hb_008714_020 Hb_008714_020 Hb_002716_140--Hb_008714_020 Hb_002400_180 Hb_002400_180 Hb_002716_140--Hb_002400_180 Hb_002716_140--Hb_008695_120 Hb_002475_160 Hb_002475_160 Hb_007643_050--Hb_002475_160 Hb_011942_080 Hb_011942_080 Hb_007643_050--Hb_011942_080 Hb_001616_090 Hb_001616_090 Hb_007643_050--Hb_001616_090 Hb_000116_110 Hb_000116_110 Hb_007643_050--Hb_000116_110 Hb_007643_050--Hb_031091_010 Hb_001158_220 Hb_001158_220 Hb_007643_050--Hb_001158_220 Hb_000866_030 Hb_000866_030 Hb_187739_020--Hb_000866_030 Hb_002982_040 Hb_002982_040 Hb_187739_020--Hb_002982_040 Hb_003656_140 Hb_003656_140 Hb_187739_020--Hb_003656_140 Hb_000160_220 Hb_000160_220 Hb_187739_020--Hb_000160_220 Hb_187739_020--Hb_008714_020 Hb_002942_160 Hb_002942_160 Hb_000364_080--Hb_002942_160 Hb_000523_090 Hb_000523_090 Hb_000364_080--Hb_000523_090 Hb_002044_060 Hb_002044_060 Hb_000364_080--Hb_002044_060 Hb_134364_010 Hb_134364_010 Hb_000364_080--Hb_134364_010 Hb_000364_080--Hb_002067_020 Hb_010642_030 Hb_010642_030 Hb_000364_080--Hb_010642_030 Hb_008695_120--Hb_003581_120 Hb_008695_120--Hb_031091_010 Hb_000322_100 Hb_000322_100 Hb_008695_120--Hb_000322_100 Hb_001019_170 Hb_001019_170 Hb_008695_120--Hb_001019_170 Hb_008695_120--Hb_002400_180 Hb_008695_120--Hb_002942_160 Hb_002067_020--Hb_000523_090 Hb_003363_010 Hb_003363_010 Hb_002067_020--Hb_003363_010 Hb_000364_060 Hb_000364_060 Hb_002067_020--Hb_000364_060 Hb_002067_020--Hb_134364_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
58.7109 35.6886 21.0973 33.796 70.5549 122.579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
56.674 39.2828 26.0894 17.4521 24.9355

CAGE analysis