Hb_001158_220

Information

Type -
Description -
Location Contig1158: 180234-182764
Sequence    

Annotation

kegg
ID rcu:RCOM_1504870
description Palmitoyltransferase ZDHHC9, putative
nr
ID XP_012090629.1
description PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
swissprot
ID Q0WQK2
description Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1
trembl
ID A0A067JRF0
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_26401 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable protein s-acyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04759: 179171-182723
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001158_220 0.0 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
2 Hb_005016_170 0.0606267702 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002475_160 0.0718585951 - - PREDICTED: 60S ribosomal export protein NMD3 [Jatropha curcas]
4 Hb_007643_050 0.0730516146 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_061908_010 0.0732360965 - - hypothetical protein JCGZ_16890 [Jatropha curcas]
6 Hb_002107_160 0.0751041081 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
7 Hb_001380_020 0.0817262278 - - 3-isopropylmalate dehydratase, putative [Ricinus communis]
8 Hb_000808_040 0.0832466425 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3 [Jatropha curcas]
9 Hb_000956_030 0.0851669679 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 19-like [Jatropha curcas]
10 Hb_017259_010 0.0857998917 - - -
11 Hb_001009_040 0.0859937869 - - PREDICTED: mitochondrial pyruvate carrier 1 [Jatropha curcas]
12 Hb_000465_430 0.0868447715 - - PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
13 Hb_070739_010 0.0873054307 - - PREDICTED: probable aminotransferase ACS12 isoform X2 [Jatropha curcas]
14 Hb_023001_050 0.0874445487 - - hypothetical protein POPTR_0006s10330g [Populus trichocarpa]
15 Hb_002495_040 0.0921773363 - - PREDICTED: chaperone protein dnaJ 6 isoform X1 [Jatropha curcas]
16 Hb_000349_060 0.0927744356 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]
17 Hb_010691_060 0.0961071002 - - PREDICTED: 40S ribosomal protein S6 [Jatropha curcas]
18 Hb_011942_080 0.0976773374 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
19 Hb_031862_180 0.0979352215 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
20 Hb_000116_110 0.0985034655 - - PREDICTED: phosphoinositide phosphatase SAC6 [Jatropha curcas]

Gene co-expression network

sample Hb_001158_220 Hb_001158_220 Hb_005016_170 Hb_005016_170 Hb_001158_220--Hb_005016_170 Hb_002475_160 Hb_002475_160 Hb_001158_220--Hb_002475_160 Hb_007643_050 Hb_007643_050 Hb_001158_220--Hb_007643_050 Hb_061908_010 Hb_061908_010 Hb_001158_220--Hb_061908_010 Hb_002107_160 Hb_002107_160 Hb_001158_220--Hb_002107_160 Hb_001380_020 Hb_001380_020 Hb_001158_220--Hb_001380_020 Hb_000465_430 Hb_000465_430 Hb_005016_170--Hb_000465_430 Hb_003502_080 Hb_003502_080 Hb_005016_170--Hb_003502_080 Hb_002671_100 Hb_002671_100 Hb_005016_170--Hb_002671_100 Hb_000956_030 Hb_000956_030 Hb_005016_170--Hb_000956_030 Hb_010691_060 Hb_010691_060 Hb_005016_170--Hb_010691_060 Hb_007336_020 Hb_007336_020 Hb_002475_160--Hb_007336_020 Hb_002475_160--Hb_007643_050 Hb_007590_080 Hb_007590_080 Hb_002475_160--Hb_007590_080 Hb_000645_150 Hb_000645_150 Hb_002475_160--Hb_000645_150 Hb_011942_080 Hb_011942_080 Hb_002475_160--Hb_011942_080 Hb_007643_050--Hb_011942_080 Hb_001616_090 Hb_001616_090 Hb_007643_050--Hb_001616_090 Hb_000116_110 Hb_000116_110 Hb_007643_050--Hb_000116_110 Hb_031091_010 Hb_031091_010 Hb_007643_050--Hb_031091_010 Hb_123475_010 Hb_123475_010 Hb_061908_010--Hb_123475_010 Hb_061908_010--Hb_000956_030 Hb_000120_500 Hb_000120_500 Hb_061908_010--Hb_000120_500 Hb_061908_010--Hb_002475_160 Hb_001009_040 Hb_001009_040 Hb_061908_010--Hb_001009_040 Hb_000157_030 Hb_000157_030 Hb_002107_160--Hb_000157_030 Hb_002107_160--Hb_010691_060 Hb_002495_040 Hb_002495_040 Hb_002107_160--Hb_002495_040 Hb_002107_160--Hb_000120_500 Hb_002107_160--Hb_000465_430 Hb_156825_010 Hb_156825_010 Hb_001380_020--Hb_156825_010 Hb_070739_010 Hb_070739_010 Hb_001380_020--Hb_070739_010 Hb_007086_010 Hb_007086_010 Hb_001380_020--Hb_007086_010 Hb_001380_020--Hb_002495_040 Hb_007594_130 Hb_007594_130 Hb_001380_020--Hb_007594_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
69.5416 28.6739 23.7707 35.2335 63.0028 101.543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
70.5531 51.1417 19.1589 24.7826 13.1125

CAGE analysis