Hb_080451_010

Information

Type -
Description -
Location Contig80451: 410-1504
Sequence    

Annotation

kegg
ID rcu:RCOM_0598000
description ankyrin repeat-containing protein, putative
nr
ID XP_012072301.1
description PREDICTED: ankyrin repeat-containing protein At2g01680 [Jatropha curcas]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID B9SJ26
description Ankyrin repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0598000 PE=4 SV=1
Gene Ontology
ID GO:0005886
description ankyrin repeat-containing protein at2g01680

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080451_010 0.0 - - PREDICTED: ankyrin repeat-containing protein At2g01680 [Jatropha curcas]
2 Hb_004162_120 0.1051192772 - - PREDICTED: vacuolar protein sorting-associated protein 41 homolog [Populus euphratica]
3 Hb_012239_030 0.1131456059 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_000107_560 0.1244573011 - - glutamate receptor 3 plant, putative [Ricinus communis]
5 Hb_065500_030 0.1297470469 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Jatropha curcas]
6 Hb_000979_240 0.1301198202 transcription factor TF Family: GRAS PREDICTED: DELLA protein GAIP-B [Jatropha curcas]
7 Hb_001205_110 0.1304981239 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 4 [Jatropha curcas]
8 Hb_000732_080 0.1323679072 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
9 Hb_002739_150 0.1343217115 - - Uncharacterized protein TCM_016791 [Theobroma cacao]
10 Hb_000406_110 0.1354296303 - - PREDICTED: transmembrane protein adipocyte-associated 1 [Jatropha curcas]
11 Hb_000175_350 0.1359672294 - - phopholipase d alpha, putative [Ricinus communis]
12 Hb_002005_120 0.1371983177 - - PREDICTED: protein MEI2-like 5 [Jatropha curcas]
13 Hb_001278_040 0.1378503499 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
14 Hb_011716_110 0.1389919064 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
15 Hb_000457_140 0.1404833963 - - PREDICTED: transmembrane protein 136-like [Jatropha curcas]
16 Hb_008143_070 0.1409919163 - - PREDICTED: factor of DNA methylation 4 [Jatropha curcas]
17 Hb_000120_520 0.1429476221 - - PREDICTED: plant intracellular Ras-group-related LRR protein 4 [Jatropha curcas]
18 Hb_001055_030 0.1453155962 - - PREDICTED: F-box/LRR-repeat protein 14 isoform X1 [Jatropha curcas]
19 Hb_000331_280 0.1453179798 - - AMP dependent CoA ligase, putative [Ricinus communis]
20 Hb_000120_970 0.1481829875 - - PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_080451_010 Hb_080451_010 Hb_004162_120 Hb_004162_120 Hb_080451_010--Hb_004162_120 Hb_012239_030 Hb_012239_030 Hb_080451_010--Hb_012239_030 Hb_000107_560 Hb_000107_560 Hb_080451_010--Hb_000107_560 Hb_065500_030 Hb_065500_030 Hb_080451_010--Hb_065500_030 Hb_000979_240 Hb_000979_240 Hb_080451_010--Hb_000979_240 Hb_001205_110 Hb_001205_110 Hb_080451_010--Hb_001205_110 Hb_004162_120--Hb_065500_030 Hb_000751_140 Hb_000751_140 Hb_004162_120--Hb_000751_140 Hb_000917_100 Hb_000917_100 Hb_004162_120--Hb_000917_100 Hb_000197_030 Hb_000197_030 Hb_004162_120--Hb_000197_030 Hb_002005_120 Hb_002005_120 Hb_004162_120--Hb_002005_120 Hb_012239_030--Hb_001205_110 Hb_000139_130 Hb_000139_130 Hb_012239_030--Hb_000139_130 Hb_008749_030 Hb_008749_030 Hb_012239_030--Hb_008749_030 Hb_010697_040 Hb_010697_040 Hb_012239_030--Hb_010697_040 Hb_000352_070 Hb_000352_070 Hb_012239_030--Hb_000352_070 Hb_089100_040 Hb_089100_040 Hb_000107_560--Hb_089100_040 Hb_000107_560--Hb_004162_120 Hb_000107_560--Hb_065500_030 Hb_009897_010 Hb_009897_010 Hb_000107_560--Hb_009897_010 Hb_000120_970 Hb_000120_970 Hb_000107_560--Hb_000120_970 Hb_065500_030--Hb_002005_120 Hb_011828_030 Hb_011828_030 Hb_065500_030--Hb_011828_030 Hb_000836_020 Hb_000836_020 Hb_065500_030--Hb_000836_020 Hb_000117_070 Hb_000117_070 Hb_065500_030--Hb_000117_070 Hb_000599_130 Hb_000599_130 Hb_065500_030--Hb_000599_130 Hb_000175_350 Hb_000175_350 Hb_000979_240--Hb_000175_350 Hb_001488_270 Hb_001488_270 Hb_000979_240--Hb_001488_270 Hb_000197_290 Hb_000197_290 Hb_000979_240--Hb_000197_290 Hb_000979_240--Hb_000751_140 Hb_000979_240--Hb_000599_130 Hb_000574_510 Hb_000574_510 Hb_000979_240--Hb_000574_510 Hb_001205_110--Hb_010697_040 Hb_001205_110--Hb_008749_030 Hb_001205_110--Hb_000139_130 Hb_000608_260 Hb_000608_260 Hb_001205_110--Hb_000608_260 Hb_002213_040 Hb_002213_040 Hb_001205_110--Hb_002213_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.9809 74.7897 11.2532 46.4364 34.0723 29.9768
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.1099 3.71594 6.68104 33.3566 13.7996

CAGE analysis