Hb_000120_970

Information

Type -
Description -
Location Contig120: 744102-746810
Sequence    

Annotation

kegg
ID rcu:RCOM_0873340
description AMP dependent ligase, putative (EC:6.2.1.26)
nr
ID XP_012065362.1
description PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]
swissprot
ID Q9SEY5
description Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana GN=AAE2 PE=2 SV=1
trembl
ID A0A067L5M5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22373 PE=4 SV=1
Gene Ontology
ID GO:0008756
description probable acyl-activating enzyme 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06239: 744290-745598
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_970 0.0 - - PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]
2 Hb_000107_560 0.1374633727 - - glutamate receptor 3 plant, putative [Ricinus communis]
3 Hb_080451_010 0.1481829875 - - PREDICTED: ankyrin repeat-containing protein At2g01680 [Jatropha curcas]
4 Hb_000521_170 0.1486609185 - - PREDICTED: callose synthase 1 [Jatropha curcas]
5 Hb_011828_030 0.1498165736 - - ubiquitin protein ligase E3a, putative [Ricinus communis]
6 Hb_020178_060 0.1560541257 - - PREDICTED: nucleobase-ascorbate transporter 3 [Jatropha curcas]
7 Hb_089100_040 0.1590056962 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
8 Hb_010398_010 0.1594614531 - - PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15a-like [Malus domestica]
9 Hb_000789_240 0.1595579935 - - gamma glutamyl transpeptidases, putative [Ricinus communis]
10 Hb_000732_080 0.1621641135 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
11 Hb_065500_030 0.1661212352 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Jatropha curcas]
12 Hb_002739_150 0.1684786801 - - Uncharacterized protein TCM_016791 [Theobroma cacao]
13 Hb_000866_370 0.1684977408 - - synaptotagmin, putative [Ricinus communis]
14 Hb_005307_040 0.1686237974 - - gulonolactone oxidase, putative [Ricinus communis]
15 Hb_000032_310 0.1706532112 - - ring finger protein, putative [Ricinus communis]
16 Hb_001416_020 0.1714920559 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
17 Hb_000640_130 0.1715943547 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
18 Hb_003107_020 0.1729404884 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
19 Hb_011716_110 0.1730473425 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
20 Hb_000571_160 0.1749661572 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000120_970 Hb_000120_970 Hb_000107_560 Hb_000107_560 Hb_000120_970--Hb_000107_560 Hb_080451_010 Hb_080451_010 Hb_000120_970--Hb_080451_010 Hb_000521_170 Hb_000521_170 Hb_000120_970--Hb_000521_170 Hb_011828_030 Hb_011828_030 Hb_000120_970--Hb_011828_030 Hb_020178_060 Hb_020178_060 Hb_000120_970--Hb_020178_060 Hb_089100_040 Hb_089100_040 Hb_000120_970--Hb_089100_040 Hb_000107_560--Hb_080451_010 Hb_000107_560--Hb_089100_040 Hb_004162_120 Hb_004162_120 Hb_000107_560--Hb_004162_120 Hb_065500_030 Hb_065500_030 Hb_000107_560--Hb_065500_030 Hb_009897_010 Hb_009897_010 Hb_000107_560--Hb_009897_010 Hb_080451_010--Hb_004162_120 Hb_012239_030 Hb_012239_030 Hb_080451_010--Hb_012239_030 Hb_080451_010--Hb_065500_030 Hb_000979_240 Hb_000979_240 Hb_080451_010--Hb_000979_240 Hb_001205_110 Hb_001205_110 Hb_080451_010--Hb_001205_110 Hb_000032_310 Hb_000032_310 Hb_000521_170--Hb_000032_310 Hb_000640_130 Hb_000640_130 Hb_000521_170--Hb_000640_130 Hb_001416_020 Hb_001416_020 Hb_000521_170--Hb_001416_020 Hb_000932_070 Hb_000932_070 Hb_000521_170--Hb_000932_070 Hb_000521_170--Hb_011828_030 Hb_011671_230 Hb_011671_230 Hb_000521_170--Hb_011671_230 Hb_001699_280 Hb_001699_280 Hb_011828_030--Hb_001699_280 Hb_000105_040 Hb_000105_040 Hb_011828_030--Hb_000105_040 Hb_011947_050 Hb_011947_050 Hb_011828_030--Hb_011947_050 Hb_000069_410 Hb_000069_410 Hb_011828_030--Hb_000069_410 Hb_000836_020 Hb_000836_020 Hb_011828_030--Hb_000836_020 Hb_003581_170 Hb_003581_170 Hb_011828_030--Hb_003581_170 Hb_002903_130 Hb_002903_130 Hb_020178_060--Hb_002903_130 Hb_000283_150 Hb_000283_150 Hb_020178_060--Hb_000283_150 Hb_008948_160 Hb_008948_160 Hb_020178_060--Hb_008948_160 Hb_012565_080 Hb_012565_080 Hb_020178_060--Hb_012565_080 Hb_000538_190 Hb_000538_190 Hb_020178_060--Hb_000538_190 Hb_020178_060--Hb_000521_170 Hb_000189_470 Hb_000189_470 Hb_089100_040--Hb_000189_470 Hb_000866_370 Hb_000866_370 Hb_089100_040--Hb_000866_370 Hb_000362_090 Hb_000362_090 Hb_089100_040--Hb_000362_090 Hb_089100_040--Hb_009897_010 Hb_000216_020 Hb_000216_020 Hb_089100_040--Hb_000216_020 Hb_089100_040--Hb_065500_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.24311 17.8514 0.672429 5.99354 8.72331 4.2776
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.52366 1.44569 1.3041 8.68296 3.16765

CAGE analysis