Hb_019641_030

Information

Type -
Description -
Location Contig19641: 29876-31840
Sequence    

Annotation

kegg
ID mdm:103417187
description chitin elicitor receptor kinase 1-like
nr
ID AIT39749.1
description chitin elicitor receptor kinase 1 [Chrysanthemum boreale]
swissprot
ID A8R7E6
description Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1
trembl
ID A0A0A0QUA4
description Chitin elicitor receptor kinase 1 OS=Chrysanthemum boreale PE=2 SV=1
Gene Ontology
ID GO:0005622
description chitin elicitor receptor kinase 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019641_030 0.0 - - chitin elicitor receptor kinase 1 [Chrysanthemum boreale]
2 Hb_002391_360 0.1089625154 - - hypothetical protein CICLE_v10026208mg [Citrus clementina]
3 Hb_005730_010 0.1110329603 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
4 Hb_002259_080 0.1147609158 - - protein transport protein sec23, putative [Ricinus communis]
5 Hb_000497_190 0.1258638047 - - sterol isomerase, putative [Ricinus communis]
6 Hb_000963_040 0.1357832715 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
7 Hb_002596_060 0.1373142977 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000579_070 0.1377029046 - - hypothetical protein CISIN_1g0119542mg, partial [Citrus sinensis]
9 Hb_000954_010 0.138453074 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
10 Hb_000161_210 0.1389656293 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
11 Hb_030982_030 0.1409194199 - - PREDICTED: uncharacterized protein LOC105636001 isoform X1 [Jatropha curcas]
12 Hb_025668_010 0.1414700668 - - unnamed protein product [Coffea canephora]
13 Hb_000010_270 0.1420383952 - - PREDICTED: vignain [Jatropha curcas]
14 Hb_000600_060 0.1445723344 - - PREDICTED: uncharacterized protein LOC105633515 isoform X1 [Jatropha curcas]
15 Hb_000635_030 0.1446810026 - - mannosyl-oligosaccharide glucosidase, putative [Ricinus communis]
16 Hb_002942_210 0.1448282993 - - alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]
17 Hb_000784_080 0.145445513 - - protein disulfide isomerase, putative [Ricinus communis]
18 Hb_000836_300 0.1455368095 - - caax prenyl protease ste24, putative [Ricinus communis]
19 Hb_004586_150 0.1456960565 - - PREDICTED: uncharacterized protein LOC105630688 [Jatropha curcas]
20 Hb_000261_210 0.1472500035 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]

Gene co-expression network

sample Hb_019641_030 Hb_019641_030 Hb_002391_360 Hb_002391_360 Hb_019641_030--Hb_002391_360 Hb_005730_010 Hb_005730_010 Hb_019641_030--Hb_005730_010 Hb_002259_080 Hb_002259_080 Hb_019641_030--Hb_002259_080 Hb_000497_190 Hb_000497_190 Hb_019641_030--Hb_000497_190 Hb_000963_040 Hb_000963_040 Hb_019641_030--Hb_000963_040 Hb_002596_060 Hb_002596_060 Hb_019641_030--Hb_002596_060 Hb_002391_360--Hb_002259_080 Hb_000365_030 Hb_000365_030 Hb_002391_360--Hb_000365_030 Hb_000130_020 Hb_000130_020 Hb_002391_360--Hb_000130_020 Hb_006501_010 Hb_006501_010 Hb_002391_360--Hb_006501_010 Hb_002391_360--Hb_005730_010 Hb_000635_030 Hb_000635_030 Hb_002391_360--Hb_000635_030 Hb_023313_040 Hb_023313_040 Hb_005730_010--Hb_023313_040 Hb_025668_010 Hb_025668_010 Hb_005730_010--Hb_025668_010 Hb_000958_080 Hb_000958_080 Hb_005730_010--Hb_000958_080 Hb_004096_160 Hb_004096_160 Hb_005730_010--Hb_004096_160 Hb_000702_090 Hb_000702_090 Hb_005730_010--Hb_000702_090 Hb_007413_040 Hb_007413_040 Hb_005730_010--Hb_007413_040 Hb_002259_080--Hb_000635_030 Hb_141069_010 Hb_141069_010 Hb_002259_080--Hb_141069_010 Hb_002259_080--Hb_000130_020 Hb_002259_080--Hb_002596_060 Hb_000243_300 Hb_000243_300 Hb_002259_080--Hb_000243_300 Hb_004724_390 Hb_004724_390 Hb_000497_190--Hb_004724_390 Hb_161568_010 Hb_161568_010 Hb_000497_190--Hb_161568_010 Hb_000261_210 Hb_000261_210 Hb_000497_190--Hb_000261_210 Hb_000154_050 Hb_000154_050 Hb_000497_190--Hb_000154_050 Hb_001450_020 Hb_001450_020 Hb_000497_190--Hb_001450_020 Hb_000497_190--Hb_005730_010 Hb_030982_030 Hb_030982_030 Hb_000963_040--Hb_030982_030 Hb_000963_040--Hb_023313_040 Hb_000600_060 Hb_000600_060 Hb_000963_040--Hb_000600_060 Hb_003119_090 Hb_003119_090 Hb_000963_040--Hb_003119_090 Hb_001227_130 Hb_001227_130 Hb_000963_040--Hb_001227_130 Hb_016347_020 Hb_016347_020 Hb_000963_040--Hb_016347_020 Hb_019840_030 Hb_019840_030 Hb_002596_060--Hb_019840_030 Hb_004837_280 Hb_004837_280 Hb_002596_060--Hb_004837_280 Hb_000122_080 Hb_000122_080 Hb_002596_060--Hb_000122_080 Hb_060980_010 Hb_060980_010 Hb_002596_060--Hb_060980_010 Hb_000161_210 Hb_000161_210 Hb_002596_060--Hb_000161_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.72478 1.79931 3.74856 3.81911 3.78244 0.878489
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.02007 1.20215 0.85392 4.23591 1.69706

CAGE analysis