Hb_141069_010

Information

Type -
Description -
Location Contig141069: 21244-22439
Sequence    

Annotation

kegg
ID rcu:RCOM_0618840
description hypothetical protein
nr
ID XP_002528846.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q69ZF3
description Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=1 SV=2
trembl
ID B9SS77
description Non-lysosomal glucosylceramidase OS=Ricinus communis GN=RCOM_0618840 PE=3 SV=1
Gene Ontology
ID GO:0005794
description non-lysosomal glucosylceramidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141069_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000635_030 0.0593698138 - - mannosyl-oligosaccharide glucosidase, putative [Ricinus communis]
3 Hb_000243_300 0.0615399864 - - catalytic, putative [Ricinus communis]
4 Hb_000258_110 0.0762198484 - - PREDICTED: probable apyrase 6 isoform X1 [Jatropha curcas]
5 Hb_000130_020 0.0783214502 - - Phosphoenolpyruvate carboxylase, putative [Ricinus communis]
6 Hb_002259_080 0.0786137951 - - protein transport protein sec23, putative [Ricinus communis]
7 Hb_039946_050 0.0797885306 - - catalytic, putative [Ricinus communis]
8 Hb_004109_370 0.0831308858 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
9 Hb_000238_030 0.0841229214 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_000001_170 0.0850767904 - - amino acid transporter, putative [Ricinus communis]
11 Hb_086063_020 0.0854408513 transcription factor TF Family: SNF2 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Jatropha curcas]
12 Hb_007747_170 0.0867014292 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
13 Hb_009252_050 0.0878334552 - - protein binding protein, putative [Ricinus communis]
14 Hb_134362_010 0.0881580396 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
15 Hb_007635_040 0.0886342652 - - PREDICTED: WAT1-related protein At3g45870 isoform X1 [Jatropha curcas]
16 Hb_188063_050 0.0893178489 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
17 Hb_001668_010 0.089739439 - - PREDICTED: RNA-binding protein with multiple splicing [Jatropha curcas]
18 Hb_001085_110 0.0899496431 - - T6D22.2 [Arabidopsis thaliana]
19 Hb_019840_030 0.0907385868 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
20 Hb_000120_280 0.0921057501 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]

Gene co-expression network

sample Hb_141069_010 Hb_141069_010 Hb_000635_030 Hb_000635_030 Hb_141069_010--Hb_000635_030 Hb_000243_300 Hb_000243_300 Hb_141069_010--Hb_000243_300 Hb_000258_110 Hb_000258_110 Hb_141069_010--Hb_000258_110 Hb_000130_020 Hb_000130_020 Hb_141069_010--Hb_000130_020 Hb_002259_080 Hb_002259_080 Hb_141069_010--Hb_002259_080 Hb_039946_050 Hb_039946_050 Hb_141069_010--Hb_039946_050 Hb_000635_030--Hb_000130_020 Hb_001668_010 Hb_001668_010 Hb_000635_030--Hb_001668_010 Hb_000120_280 Hb_000120_280 Hb_000635_030--Hb_000120_280 Hb_000635_030--Hb_002259_080 Hb_004267_040 Hb_004267_040 Hb_000635_030--Hb_004267_040 Hb_001085_110 Hb_001085_110 Hb_000243_300--Hb_001085_110 Hb_004109_370 Hb_004109_370 Hb_000243_300--Hb_004109_370 Hb_009252_050 Hb_009252_050 Hb_000243_300--Hb_009252_050 Hb_188063_050 Hb_188063_050 Hb_000243_300--Hb_188063_050 Hb_000243_300--Hb_039946_050 Hb_001141_310 Hb_001141_310 Hb_000258_110--Hb_001141_310 Hb_000836_460 Hb_000836_460 Hb_000258_110--Hb_000836_460 Hb_086063_020 Hb_086063_020 Hb_000258_110--Hb_086063_020 Hb_000238_030 Hb_000238_030 Hb_000258_110--Hb_000238_030 Hb_000215_300 Hb_000215_300 Hb_000258_110--Hb_000215_300 Hb_004037_020 Hb_004037_020 Hb_000258_110--Hb_004037_020 Hb_178968_050 Hb_178968_050 Hb_000130_020--Hb_178968_050 Hb_000130_020--Hb_000120_280 Hb_140049_080 Hb_140049_080 Hb_000130_020--Hb_140049_080 Hb_001318_020 Hb_001318_020 Hb_000130_020--Hb_001318_020 Hb_002259_080--Hb_000130_020 Hb_002596_060 Hb_002596_060 Hb_002259_080--Hb_002596_060 Hb_002259_080--Hb_000243_300 Hb_002391_360 Hb_002391_360 Hb_002259_080--Hb_002391_360 Hb_005663_110 Hb_005663_110 Hb_039946_050--Hb_005663_110 Hb_041327_010 Hb_041327_010 Hb_039946_050--Hb_041327_010 Hb_179306_020 Hb_179306_020 Hb_039946_050--Hb_179306_020 Hb_000099_030 Hb_000099_030 Hb_039946_050--Hb_000099_030 Hb_000069_120 Hb_000069_120 Hb_039946_050--Hb_000069_120 Hb_000537_050 Hb_000537_050 Hb_039946_050--Hb_000537_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.6656 10.5755 7.94128 13.5596 11.2351 6.9027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.62669 4.13099 3.70138 13.9337 9.0993

CAGE analysis