Hb_012506_020

Information

Type -
Description -
Location Contig12506: 26413-31104
Sequence    

Annotation

kegg
ID pop:POPTR_0009s15270g
description POPTRDRAFT_200186; hypothetical protein
nr
ID XP_012076172.1
description PREDICTED: BTB/POZ domain-containing protein At3g44820 isoform X2 [Jatropha curcas]
swissprot
ID Q9FYC8
description BTB/POZ domain-containing protein At3g44820 OS=Arabidopsis thaliana GN=At3g44820 PE=2 SV=2
trembl
ID A0A067KRA1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11237 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07652: 26510-29159 , PASA_asmbl_07653: 26597-31062
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012506_020 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g44820 isoform X2 [Jatropha curcas]
2 Hb_000208_190 0.0963591012 - - PREDICTED: uncharacterized protein LOC105648580 [Jatropha curcas]
3 Hb_000363_290 0.119142824 - - fimbrin, putative [Ricinus communis]
4 Hb_004705_160 0.1238409573 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
5 Hb_000107_340 0.1241621189 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105637652 [Jatropha curcas]
6 Hb_159809_060 0.124641034 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 isoform X1 [Jatropha curcas]
7 Hb_022378_010 0.1354909374 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
8 Hb_006907_060 0.1392005303 - - Alternative oxidase 4, chloroplast precursor, putative [Ricinus communis]
9 Hb_000445_090 0.139246908 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH2 [Jatropha curcas]
10 Hb_000788_030 0.1394415659 - - PREDICTED: dynamin-2A [Jatropha curcas]
11 Hb_000128_060 0.1396520605 - - PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1 [Vitis vinifera]
12 Hb_001014_070 0.1413047083 - - PREDICTED: uncharacterized protein LOC105647305 [Jatropha curcas]
13 Hb_073973_090 0.1444591362 - - Aminotransferase ybdL, putative [Ricinus communis]
14 Hb_002025_250 0.144677173 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Jatropha curcas]
15 Hb_000069_610 0.144729418 - - PREDICTED: protein SUPPRESSOR OF PHYA-105 1 [Jatropha curcas]
16 Hb_000243_120 0.1452759429 - - PREDICTED: MORC family CW-type zinc finger protein 3-like isoform X2 [Jatropha curcas]
17 Hb_002639_040 0.1454645534 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
18 Hb_006198_190 0.1456097735 - - PREDICTED: desumoylating isopeptidase 1 [Jatropha curcas]
19 Hb_008705_020 0.1479380682 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
20 Hb_002631_240 0.1482338802 - - JHL17M24.3 [Jatropha curcas]

Gene co-expression network

sample Hb_012506_020 Hb_012506_020 Hb_000208_190 Hb_000208_190 Hb_012506_020--Hb_000208_190 Hb_000363_290 Hb_000363_290 Hb_012506_020--Hb_000363_290 Hb_004705_160 Hb_004705_160 Hb_012506_020--Hb_004705_160 Hb_000107_340 Hb_000107_340 Hb_012506_020--Hb_000107_340 Hb_159809_060 Hb_159809_060 Hb_012506_020--Hb_159809_060 Hb_022378_010 Hb_022378_010 Hb_012506_020--Hb_022378_010 Hb_000208_190--Hb_004705_160 Hb_000208_190--Hb_022378_010 Hb_005000_080 Hb_005000_080 Hb_000208_190--Hb_005000_080 Hb_138585_030 Hb_138585_030 Hb_000208_190--Hb_138585_030 Hb_000788_030 Hb_000788_030 Hb_000208_190--Hb_000788_030 Hb_010344_020 Hb_010344_020 Hb_000208_190--Hb_010344_020 Hb_002042_050 Hb_002042_050 Hb_000363_290--Hb_002042_050 Hb_001014_070 Hb_001014_070 Hb_000363_290--Hb_001014_070 Hb_000703_190 Hb_000703_190 Hb_000363_290--Hb_000703_190 Hb_000567_230 Hb_000567_230 Hb_000363_290--Hb_000567_230 Hb_001817_170 Hb_001817_170 Hb_000363_290--Hb_001817_170 Hb_000243_260 Hb_000243_260 Hb_000363_290--Hb_000243_260 Hb_000862_100 Hb_000862_100 Hb_004705_160--Hb_000862_100 Hb_004705_160--Hb_138585_030 Hb_000748_090 Hb_000748_090 Hb_004705_160--Hb_000748_090 Hb_068079_010 Hb_068079_010 Hb_004705_160--Hb_068079_010 Hb_004705_160--Hb_000788_030 Hb_000555_020 Hb_000555_020 Hb_000107_340--Hb_000555_020 Hb_005235_070 Hb_005235_070 Hb_000107_340--Hb_005235_070 Hb_000035_090 Hb_000035_090 Hb_000107_340--Hb_000035_090 Hb_102948_010 Hb_102948_010 Hb_000107_340--Hb_102948_010 Hb_003747_120 Hb_003747_120 Hb_000107_340--Hb_003747_120 Hb_000107_340--Hb_022378_010 Hb_028487_070 Hb_028487_070 Hb_159809_060--Hb_028487_070 Hb_002639_040 Hb_002639_040 Hb_159809_060--Hb_002639_040 Hb_159809_060--Hb_000363_290 Hb_001347_060 Hb_001347_060 Hb_159809_060--Hb_001347_060 Hb_000645_280 Hb_000645_280 Hb_159809_060--Hb_000645_280 Hb_001269_600 Hb_001269_600 Hb_159809_060--Hb_001269_600 Hb_068804_090 Hb_068804_090 Hb_022378_010--Hb_068804_090 Hb_004375_050 Hb_004375_050 Hb_022378_010--Hb_004375_050 Hb_000340_040 Hb_000340_040 Hb_022378_010--Hb_000340_040 Hb_005511_140 Hb_005511_140 Hb_022378_010--Hb_005511_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.785889 3.32724 4.98674 3.7753 3.44748 0.90367
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.01201 3.30548 2.54531 2.05357 6.31292

CAGE analysis