Hb_001014_070

Information

Type -
Description -
Location Contig1014: 70201-71808
Sequence    

Annotation

kegg
ID rcu:RCOM_1438250
description hypothetical protein
nr
ID XP_012088720.1
description PREDICTED: uncharacterized protein LOC105647305 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JTF5
description Histone-lysine N-methyltransferase OS=Jatropha curcas GN=JCGZ_23098 PE=4 SV=1
Gene Ontology
ID GO:0016740
description histone-lysine n- h3 lysine-9 specific suvh4-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00696: 69415-70950
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001014_070 0.0 - - PREDICTED: uncharacterized protein LOC105647305 [Jatropha curcas]
2 Hb_001014_060 0.0399524563 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
3 Hb_000025_350 0.0515946376 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
4 Hb_001357_200 0.0629894252 transcription factor TF Family: Rcd1-like PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas]
5 Hb_000363_290 0.0723897707 - - fimbrin, putative [Ricinus communis]
6 Hb_000046_540 0.0852677989 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Populus euphratica]
7 Hb_074197_040 0.0853789544 - - PREDICTED: SNARE-interacting protein KEULE [Jatropha curcas]
8 Hb_001124_130 0.0860129648 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
9 Hb_002042_050 0.0867988389 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
10 Hb_000638_130 0.0877767069 - - PREDICTED: SAL1 phosphatase-like [Jatropha curcas]
11 Hb_000260_460 0.0883328074 - - Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus communis]
12 Hb_000304_080 0.0889321093 - - PREDICTED: probable helicase MAGATAMA 3 isoform X1 [Jatropha curcas]
13 Hb_003913_130 0.0918136971 - - histone deacetylase 1, 2 ,3, putative [Ricinus communis]
14 Hb_001488_020 0.0923283667 - - PREDICTED: probable mitochondrial-processing peptidase subunit beta [Jatropha curcas]
15 Hb_000703_190 0.0958213661 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]
16 Hb_002025_250 0.0972843959 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Jatropha curcas]
17 Hb_000078_140 0.0973925005 - - PREDICTED: WD repeat-containing protein 11 [Jatropha curcas]
18 Hb_030736_040 0.0981476639 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
19 Hb_000167_110 0.0983096335 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
20 Hb_011377_040 0.0987109342 - - PREDICTED: uncharacterized protein LOC105647286 [Jatropha curcas]

Gene co-expression network

sample Hb_001014_070 Hb_001014_070 Hb_001014_060 Hb_001014_060 Hb_001014_070--Hb_001014_060 Hb_000025_350 Hb_000025_350 Hb_001014_070--Hb_000025_350 Hb_001357_200 Hb_001357_200 Hb_001014_070--Hb_001357_200 Hb_000363_290 Hb_000363_290 Hb_001014_070--Hb_000363_290 Hb_000046_540 Hb_000046_540 Hb_001014_070--Hb_000046_540 Hb_074197_040 Hb_074197_040 Hb_001014_070--Hb_074197_040 Hb_001014_060--Hb_000025_350 Hb_001014_060--Hb_001357_200 Hb_000638_130 Hb_000638_130 Hb_001014_060--Hb_000638_130 Hb_003913_130 Hb_003913_130 Hb_001014_060--Hb_003913_130 Hb_000120_640 Hb_000120_640 Hb_001014_060--Hb_000120_640 Hb_000025_350--Hb_001357_200 Hb_000025_350--Hb_003913_130 Hb_000304_080 Hb_000304_080 Hb_000025_350--Hb_000304_080 Hb_002042_050 Hb_002042_050 Hb_000025_350--Hb_002042_050 Hb_001357_200--Hb_003913_130 Hb_001357_200--Hb_000304_080 Hb_007533_040 Hb_007533_040 Hb_001357_200--Hb_007533_040 Hb_000363_290--Hb_002042_050 Hb_000703_190 Hb_000703_190 Hb_000363_290--Hb_000703_190 Hb_000567_230 Hb_000567_230 Hb_000363_290--Hb_000567_230 Hb_001817_170 Hb_001817_170 Hb_000363_290--Hb_001817_170 Hb_000243_260 Hb_000243_260 Hb_000363_290--Hb_000243_260 Hb_002078_340 Hb_002078_340 Hb_000046_540--Hb_002078_340 Hb_002025_250 Hb_002025_250 Hb_000046_540--Hb_002025_250 Hb_000078_140 Hb_000078_140 Hb_000046_540--Hb_000078_140 Hb_001195_400 Hb_001195_400 Hb_000046_540--Hb_001195_400 Hb_002769_030 Hb_002769_030 Hb_000046_540--Hb_002769_030 Hb_000300_470 Hb_000300_470 Hb_000046_540--Hb_000300_470 Hb_074197_040--Hb_000078_140 Hb_000815_300 Hb_000815_300 Hb_074197_040--Hb_000815_300 Hb_011377_040 Hb_011377_040 Hb_074197_040--Hb_011377_040 Hb_001301_270 Hb_001301_270 Hb_074197_040--Hb_001301_270 Hb_065968_010 Hb_065968_010 Hb_074197_040--Hb_065968_010 Hb_006970_020 Hb_006970_020 Hb_074197_040--Hb_006970_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.03487 2.46889 4.22769 3.31629 1.7432 1.16848
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.58612 1.81511 3.50442 2.85924 4.71229

CAGE analysis