Hb_000208_190

Information

Type -
Description -
Location Contig208: 202241-209948
Sequence    

Annotation

kegg
ID rcu:RCOM_0272590
description hypothetical protein
nr
ID XP_012090407.1
description PREDICTED: uncharacterized protein LOC105648580 [Jatropha curcas]
swissprot
ID Q24746
description Protein neuralized OS=Drosophila virilis GN=neur PE=3 SV=1
trembl
ID A0A067L9G7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01567 PE=4 SV=1
Gene Ontology
ID GO:0008270
description protein neuralized

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21496: 202315-209821 , PASA_asmbl_21497: 209949-210334
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000208_190 0.0 - - PREDICTED: uncharacterized protein LOC105648580 [Jatropha curcas]
2 Hb_004705_160 0.0753091965 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
3 Hb_022378_010 0.0785037215 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]
4 Hb_005000_080 0.0886040918 - - PREDICTED: thioredoxin-like 2, chloroplastic [Populus euphratica]
5 Hb_138585_030 0.0899832308 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
6 Hb_000788_030 0.0925674062 - - PREDICTED: dynamin-2A [Jatropha curcas]
7 Hb_010344_020 0.0941242986 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Jatropha curcas]
8 Hb_000069_610 0.0957151041 - - PREDICTED: protein SUPPRESSOR OF PHYA-105 1 [Jatropha curcas]
9 Hb_012506_020 0.0963591012 - - PREDICTED: BTB/POZ domain-containing protein At3g44820 isoform X2 [Jatropha curcas]
10 Hb_068804_090 0.1004177921 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
11 Hb_000107_340 0.1021051982 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105637652 [Jatropha curcas]
12 Hb_022092_030 0.1031012473 - - PREDICTED: lipoyl synthase, mitochondrial [Jatropha curcas]
13 Hb_006907_060 0.1033563583 - - Alternative oxidase 4, chloroplast precursor, putative [Ricinus communis]
14 Hb_000088_260 0.104031509 - - PREDICTED: uncharacterized protein LOC105636987 [Jatropha curcas]
15 Hb_000748_090 0.1044164262 - - glucose inhibited division protein A, putative [Ricinus communis]
16 Hb_008705_020 0.1064610473 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
17 Hb_004375_050 0.1085092982 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_002631_240 0.1092847566 - - JHL17M24.3 [Jatropha curcas]
19 Hb_001014_070 0.1098583745 - - PREDICTED: uncharacterized protein LOC105647305 [Jatropha curcas]
20 Hb_000555_020 0.1101352264 - - APO protein 2, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000208_190 Hb_000208_190 Hb_004705_160 Hb_004705_160 Hb_000208_190--Hb_004705_160 Hb_022378_010 Hb_022378_010 Hb_000208_190--Hb_022378_010 Hb_005000_080 Hb_005000_080 Hb_000208_190--Hb_005000_080 Hb_138585_030 Hb_138585_030 Hb_000208_190--Hb_138585_030 Hb_000788_030 Hb_000788_030 Hb_000208_190--Hb_000788_030 Hb_010344_020 Hb_010344_020 Hb_000208_190--Hb_010344_020 Hb_000862_100 Hb_000862_100 Hb_004705_160--Hb_000862_100 Hb_004705_160--Hb_138585_030 Hb_000748_090 Hb_000748_090 Hb_004705_160--Hb_000748_090 Hb_068079_010 Hb_068079_010 Hb_004705_160--Hb_068079_010 Hb_004705_160--Hb_000788_030 Hb_068804_090 Hb_068804_090 Hb_022378_010--Hb_068804_090 Hb_004375_050 Hb_004375_050 Hb_022378_010--Hb_004375_050 Hb_000107_340 Hb_000107_340 Hb_022378_010--Hb_000107_340 Hb_000340_040 Hb_000340_040 Hb_022378_010--Hb_000340_040 Hb_005511_140 Hb_005511_140 Hb_022378_010--Hb_005511_140 Hb_003994_080 Hb_003994_080 Hb_005000_080--Hb_003994_080 Hb_005000_080--Hb_138585_030 Hb_000188_060 Hb_000188_060 Hb_005000_080--Hb_000188_060 Hb_000235_070 Hb_000235_070 Hb_005000_080--Hb_000235_070 Hb_001021_210 Hb_001021_210 Hb_005000_080--Hb_001021_210 Hb_138585_030--Hb_010344_020 Hb_000116_250 Hb_000116_250 Hb_138585_030--Hb_000116_250 Hb_000579_040 Hb_000579_040 Hb_138585_030--Hb_000579_040 Hb_010620_050 Hb_010620_050 Hb_138585_030--Hb_010620_050 Hb_138585_030--Hb_068804_090 Hb_001703_040 Hb_001703_040 Hb_000788_030--Hb_001703_040 Hb_004324_360 Hb_004324_360 Hb_000788_030--Hb_004324_360 Hb_000476_060 Hb_000476_060 Hb_000788_030--Hb_000476_060 Hb_087313_010 Hb_087313_010 Hb_000788_030--Hb_087313_010 Hb_002684_020 Hb_002684_020 Hb_000788_030--Hb_002684_020 Hb_006846_170 Hb_006846_170 Hb_000788_030--Hb_006846_170 Hb_005147_080 Hb_005147_080 Hb_010344_020--Hb_005147_080 Hb_011861_050 Hb_011861_050 Hb_010344_020--Hb_011861_050 Hb_002915_010 Hb_002915_010 Hb_010344_020--Hb_002915_010 Hb_000094_100 Hb_000094_100 Hb_010344_020--Hb_000094_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.01767 8.18445 14.4692 9.63735 5.12312 3.45932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.81248 6.08913 7.4606 4.72885 18.1009

CAGE analysis