Hb_008317_020

Information

Type -
Description -
Location Contig8317: 14450-16372
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008317_020 0.0 - - -
2 Hb_111868_010 0.2771646031 - - hypothetical protein CICLE_v10029531mg [Citrus clementina]
3 Hb_001266_120 0.2908062736 - - auxilin, putative [Ricinus communis]
4 Hb_006810_020 0.2912231246 - - PREDICTED: NADPH:quinone oxidoreductase-like [Jatropha curcas]
5 Hb_111528_010 0.2967111702 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
6 Hb_000926_050 0.3098762669 - - PREDICTED: vinorine synthase-like [Populus euphratica]
7 Hb_000417_020 0.3111927835 - - PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
8 Hb_012395_120 0.314035234 - - -
9 Hb_000696_190 0.3197266678 - - PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Jatropha curcas]
10 Hb_001516_050 0.3215004686 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
11 Hb_004807_050 0.3229615459 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
12 Hb_001538_020 0.3376399167 - - PREDICTED: uncharacterized protein LOC105629608 [Jatropha curcas]
13 Hb_000340_200 0.3405985975 - - PREDICTED: uncharacterized protein LOC105650039 [Jatropha curcas]
14 Hb_001942_020 0.341156212 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
15 Hb_002217_390 0.3424014016 - - PREDICTED: galactokinase [Jatropha curcas]
16 Hb_153395_010 0.3427874158 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
17 Hb_001597_020 0.3434713338 - - PREDICTED: uncharacterized protein LOC105629846 isoform X2 [Jatropha curcas]
18 Hb_000270_710 0.3440750244 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
19 Hb_046157_010 0.3449583869 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
20 Hb_002320_090 0.3462402643 - - PREDICTED: endoglucanase 25-like [Jatropha curcas]

Gene co-expression network

sample Hb_008317_020 Hb_008317_020 Hb_111868_010 Hb_111868_010 Hb_008317_020--Hb_111868_010 Hb_001266_120 Hb_001266_120 Hb_008317_020--Hb_001266_120 Hb_006810_020 Hb_006810_020 Hb_008317_020--Hb_006810_020 Hb_111528_010 Hb_111528_010 Hb_008317_020--Hb_111528_010 Hb_000926_050 Hb_000926_050 Hb_008317_020--Hb_000926_050 Hb_000417_020 Hb_000417_020 Hb_008317_020--Hb_000417_020 Hb_000370_040 Hb_000370_040 Hb_111868_010--Hb_000370_040 Hb_001516_050 Hb_001516_050 Hb_111868_010--Hb_001516_050 Hb_022213_030 Hb_022213_030 Hb_111868_010--Hb_022213_030 Hb_001538_020 Hb_001538_020 Hb_111868_010--Hb_001538_020 Hb_019333_010 Hb_019333_010 Hb_111868_010--Hb_019333_010 Hb_010417_130 Hb_010417_130 Hb_111868_010--Hb_010417_130 Hb_002320_090 Hb_002320_090 Hb_001266_120--Hb_002320_090 Hb_005288_110 Hb_005288_110 Hb_001266_120--Hb_005288_110 Hb_024570_040 Hb_024570_040 Hb_001266_120--Hb_024570_040 Hb_003632_030 Hb_003632_030 Hb_001266_120--Hb_003632_030 Hb_085187_010 Hb_085187_010 Hb_001266_120--Hb_085187_010 Hb_177343_010 Hb_177343_010 Hb_001266_120--Hb_177343_010 Hb_028872_020 Hb_028872_020 Hb_006810_020--Hb_028872_020 Hb_004021_020 Hb_004021_020 Hb_006810_020--Hb_004021_020 Hb_002529_070 Hb_002529_070 Hb_006810_020--Hb_002529_070 Hb_001793_030 Hb_001793_030 Hb_006810_020--Hb_001793_030 Hb_000100_110 Hb_000100_110 Hb_006810_020--Hb_000100_110 Hb_000414_180 Hb_000414_180 Hb_006810_020--Hb_000414_180 Hb_000866_180 Hb_000866_180 Hb_111528_010--Hb_000866_180 Hb_000118_090 Hb_000118_090 Hb_111528_010--Hb_000118_090 Hb_009692_040 Hb_009692_040 Hb_111528_010--Hb_009692_040 Hb_001597_020 Hb_001597_020 Hb_111528_010--Hb_001597_020 Hb_003768_020 Hb_003768_020 Hb_111528_010--Hb_003768_020 Hb_000340_200 Hb_000340_200 Hb_111528_010--Hb_000340_200 Hb_004096_200 Hb_004096_200 Hb_000926_050--Hb_004096_200 Hb_119443_010 Hb_119443_010 Hb_000926_050--Hb_119443_010 Hb_012395_120 Hb_012395_120 Hb_000926_050--Hb_012395_120 Hb_017043_040 Hb_017043_040 Hb_000926_050--Hb_017043_040 Hb_176680_010 Hb_176680_010 Hb_000926_050--Hb_176680_010 Hb_113379_010 Hb_113379_010 Hb_000926_050--Hb_113379_010 Hb_000417_020--Hb_001538_020 Hb_001269_520 Hb_001269_520 Hb_000417_020--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_000417_020--Hb_000251_050 Hb_003702_070 Hb_003702_070 Hb_000417_020--Hb_003702_070 Hb_000071_160 Hb_000071_160 Hb_000417_020--Hb_000071_160 Hb_000417_020--Hb_002320_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.122446 0 0.0945123 0.0838384 0.0576138 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.141297 0.208964

CAGE analysis