Hb_006810_020

Information

Type -
Description -
Location Contig6810: 6662-7408
Sequence    

Annotation

kegg
ID rcu:RCOM_1452390
description NADPH:quinone oxidoreductase, putative (EC:1.6.5.2)
nr
ID XP_012068669.1
description PREDICTED: NADPH:quinone oxidoreductase-like [Jatropha curcas]
swissprot
ID Q9LK88
description NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1
trembl
ID A0A067KWE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24535 PE=4 SV=1
Gene Ontology
ID GO:0005829
description nadph:quinone oxidoreductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006810_020 0.0 - - PREDICTED: NADPH:quinone oxidoreductase-like [Jatropha curcas]
2 Hb_028872_020 0.254240182 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
3 Hb_004021_020 0.2716548709 - - PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
4 Hb_002529_070 0.2741466097 - - PREDICTED: putative late blight resistance protein homolog R1B-19 [Pyrus x bretschneideri]
5 Hb_001793_030 0.2748387217 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
6 Hb_000100_110 0.2763653854 - - -
7 Hb_000414_180 0.2783236558 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Vitis vinifera]
8 Hb_182424_020 0.2788596011 - - hypothetical protein POPTR_0006s24190g [Populus trichocarpa]
9 Hb_002973_120 0.2814582757 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
10 Hb_003030_050 0.2822271875 - - -
11 Hb_005843_060 0.282462768 - - PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X3 [Nelumbo nucifera]
12 Hb_170878_020 0.2825103147 - - -
13 Hb_021428_010 0.2880843758 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
14 Hb_016835_020 0.2883458582 - - unnamed protein product [Coffea canephora]
15 Hb_004052_060 0.2886090025 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
16 Hb_017225_010 0.2888115764 - - PREDICTED: nodulation receptor kinase-like [Jatropha curcas]
17 Hb_001811_080 0.289548465 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
18 Hb_009316_050 0.2906602893 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
19 Hb_003462_170 0.290807048 - - unnamed protein product [Vitis vinifera]
20 Hb_008317_020 0.2912231246 - - -

Gene co-expression network

sample Hb_006810_020 Hb_006810_020 Hb_028872_020 Hb_028872_020 Hb_006810_020--Hb_028872_020 Hb_004021_020 Hb_004021_020 Hb_006810_020--Hb_004021_020 Hb_002529_070 Hb_002529_070 Hb_006810_020--Hb_002529_070 Hb_001793_030 Hb_001793_030 Hb_006810_020--Hb_001793_030 Hb_000100_110 Hb_000100_110 Hb_006810_020--Hb_000100_110 Hb_000414_180 Hb_000414_180 Hb_006810_020--Hb_000414_180 Hb_001221_350 Hb_001221_350 Hb_028872_020--Hb_001221_350 Hb_003462_170 Hb_003462_170 Hb_028872_020--Hb_003462_170 Hb_003183_010 Hb_003183_010 Hb_028872_020--Hb_003183_010 Hb_094484_010 Hb_094484_010 Hb_028872_020--Hb_094484_010 Hb_062192_050 Hb_062192_050 Hb_028872_020--Hb_062192_050 Hb_003427_040 Hb_003427_040 Hb_028872_020--Hb_003427_040 Hb_000117_150 Hb_000117_150 Hb_004021_020--Hb_000117_150 Hb_005288_060 Hb_005288_060 Hb_004021_020--Hb_005288_060 Hb_002973_120 Hb_002973_120 Hb_004021_020--Hb_002973_120 Hb_005743_030 Hb_005743_030 Hb_004021_020--Hb_005743_030 Hb_004021_020--Hb_002529_070 Hb_029727_010 Hb_029727_010 Hb_004021_020--Hb_029727_010 Hb_002016_130 Hb_002016_130 Hb_002529_070--Hb_002016_130 Hb_009848_060 Hb_009848_060 Hb_002529_070--Hb_009848_060 Hb_030885_010 Hb_030885_010 Hb_002529_070--Hb_030885_010 Hb_001005_040 Hb_001005_040 Hb_002529_070--Hb_001005_040 Hb_170878_020 Hb_170878_020 Hb_002529_070--Hb_170878_020 Hb_004052_060 Hb_004052_060 Hb_002529_070--Hb_004052_060 Hb_007933_030 Hb_007933_030 Hb_001793_030--Hb_007933_030 Hb_168031_020 Hb_168031_020 Hb_001793_030--Hb_168031_020 Hb_078477_060 Hb_078477_060 Hb_001793_030--Hb_078477_060 Hb_001080_150 Hb_001080_150 Hb_001793_030--Hb_001080_150 Hb_000329_080 Hb_000329_080 Hb_001793_030--Hb_000329_080 Hb_001793_030--Hb_000414_180 Hb_000100_110--Hb_001221_350 Hb_006111_040 Hb_006111_040 Hb_000100_110--Hb_006111_040 Hb_000100_110--Hb_001793_030 Hb_009851_090 Hb_009851_090 Hb_000100_110--Hb_009851_090 Hb_127552_050 Hb_127552_050 Hb_000100_110--Hb_127552_050 Hb_002631_270 Hb_002631_270 Hb_000100_110--Hb_002631_270 Hb_062013_010 Hb_062013_010 Hb_000414_180--Hb_062013_010 Hb_000414_180--Hb_005288_060 Hb_000414_180--Hb_000329_080 Hb_000414_180--Hb_001080_150 Hb_000454_160 Hb_000454_160 Hb_000414_180--Hb_000454_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0843349 0 0.0982373 0.17146 0.0848554 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0768829 0 0.37788 0.895739

CAGE analysis