Hb_000100_110

Information

Type -
Description -
Location Contig100: 288870-292047
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000100_110 0.0 - - -
2 Hb_001221_350 0.1842115215 - - conserved hypothetical protein [Ricinus communis]
3 Hb_006111_040 0.2071426197 - - PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]
4 Hb_001793_030 0.2190655769 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
5 Hb_009851_090 0.219101109 - - Protein ABIL2, putative [Ricinus communis]
6 Hb_127552_050 0.2247616606 - - hypothetical protein VITISV_030752 [Vitis vinifera]
7 Hb_002631_270 0.2251210156 transcription factor TF Family: MYB hypothetical protein POPTR_0005s09930g [Populus trichocarpa]
8 Hb_003183_010 0.2276758638 - - PREDICTED: uncharacterized protein LOC105785048, partial [Gossypium raimondii]
9 Hb_032016_010 0.2298911328 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like isoform X1 [Citrus sinensis]
10 Hb_006483_120 0.231806803 - - DNA binding protein, putative [Ricinus communis]
11 Hb_040245_010 0.2370162217 - - hypothetical protein CISIN_1g039575mg, partial [Citrus sinensis]
12 Hb_010589_030 0.2373618186 - - PREDICTED: proline-rich receptor-like protein kinase PERK2 [Jatropha curcas]
13 Hb_018272_050 0.2378613787 - - hypothetical protein VITISV_037409 [Vitis vinifera]
14 Hb_003311_020 0.2391720555 - - conserved hypothetical protein [Ricinus communis]
15 Hb_129420_010 0.2415502926 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
16 Hb_155423_010 0.2418687831 - - -
17 Hb_000415_080 0.241877207 - - -
18 Hb_003073_030 0.2425005451 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003540_170 0.2431876022 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Jatropha curcas]
20 Hb_003994_070 0.2436512903 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000100_110 Hb_000100_110 Hb_001221_350 Hb_001221_350 Hb_000100_110--Hb_001221_350 Hb_006111_040 Hb_006111_040 Hb_000100_110--Hb_006111_040 Hb_001793_030 Hb_001793_030 Hb_000100_110--Hb_001793_030 Hb_009851_090 Hb_009851_090 Hb_000100_110--Hb_009851_090 Hb_127552_050 Hb_127552_050 Hb_000100_110--Hb_127552_050 Hb_002631_270 Hb_002631_270 Hb_000100_110--Hb_002631_270 Hb_032016_010 Hb_032016_010 Hb_001221_350--Hb_032016_010 Hb_028872_020 Hb_028872_020 Hb_001221_350--Hb_028872_020 Hb_003183_010 Hb_003183_010 Hb_001221_350--Hb_003183_010 Hb_007533_050 Hb_007533_050 Hb_001221_350--Hb_007533_050 Hb_003073_030 Hb_003073_030 Hb_001221_350--Hb_003073_030 Hb_001221_350--Hb_009851_090 Hb_151401_010 Hb_151401_010 Hb_006111_040--Hb_151401_010 Hb_002529_070 Hb_002529_070 Hb_006111_040--Hb_002529_070 Hb_000011_470 Hb_000011_470 Hb_006111_040--Hb_000011_470 Hb_001981_020 Hb_001981_020 Hb_006111_040--Hb_001981_020 Hb_006111_040--Hb_007533_050 Hb_006455_020 Hb_006455_020 Hb_006111_040--Hb_006455_020 Hb_007933_030 Hb_007933_030 Hb_001793_030--Hb_007933_030 Hb_168031_020 Hb_168031_020 Hb_001793_030--Hb_168031_020 Hb_078477_060 Hb_078477_060 Hb_001793_030--Hb_078477_060 Hb_001080_150 Hb_001080_150 Hb_001793_030--Hb_001080_150 Hb_000329_080 Hb_000329_080 Hb_001793_030--Hb_000329_080 Hb_000414_180 Hb_000414_180 Hb_001793_030--Hb_000414_180 Hb_009851_090--Hb_032016_010 Hb_003994_070 Hb_003994_070 Hb_009851_090--Hb_003994_070 Hb_003311_020 Hb_003311_020 Hb_009851_090--Hb_003311_020 Hb_155423_010 Hb_155423_010 Hb_009851_090--Hb_155423_010 Hb_009851_090--Hb_002631_270 Hb_000567_270 Hb_000567_270 Hb_009851_090--Hb_000567_270 Hb_001385_070 Hb_001385_070 Hb_127552_050--Hb_001385_070 Hb_011649_030 Hb_011649_030 Hb_127552_050--Hb_011649_030 Hb_000123_340 Hb_000123_340 Hb_127552_050--Hb_000123_340 Hb_000574_330 Hb_000574_330 Hb_127552_050--Hb_000574_330 Hb_041813_040 Hb_041813_040 Hb_127552_050--Hb_041813_040 Hb_004520_010 Hb_004520_010 Hb_127552_050--Hb_004520_010 Hb_151870_010 Hb_151870_010 Hb_002631_270--Hb_151870_010 Hb_002631_270--Hb_155423_010 Hb_017225_030 Hb_017225_030 Hb_002631_270--Hb_017225_030 Hb_006807_010 Hb_006807_010 Hb_002631_270--Hb_006807_010 Hb_029727_010 Hb_029727_010 Hb_002631_270--Hb_029727_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0489445 0.0701099 0.0343368 0.136399 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0811793 0 0.129771 0.846037

CAGE analysis