Hb_062013_010

Information

Type -
Description -
Location Contig62013: 53-1675
Sequence    

Annotation

kegg
ID rcu:RCOM_1429720
description phosphoprotein phosphatase, putative (EC:3.1.3.16)
nr
ID XP_002512305.1
description phosphoprotein phosphatase, putative [Ricinus communis]
swissprot
ID Q9T048
description Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1
trembl
ID B9REY6
description Phosphoprotein phosphatase, putative OS=Ricinus communis GN=RCOM_1429720 PE=4 SV=1
Gene Ontology
ID GO:0016787
description disease resistance gene nbs-lrr family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062013_010 0.0 - - phosphoprotein phosphatase, putative [Ricinus communis]
2 Hb_000329_080 0.1182965354 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
3 Hb_001080_150 0.1188127602 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
4 Hb_000414_180 0.123816606 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Vitis vinifera]
5 Hb_000963_090 0.1363226762 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea brasiliensis]
6 Hb_001365_010 0.1445940696 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
7 Hb_182651_020 0.1461192762 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_001195_370 0.1499996414 - - -
9 Hb_001811_080 0.1524612444 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
10 Hb_000997_290 0.1621976436 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
11 Hb_000997_320 0.16673765 - - PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
12 Hb_000594_130 0.1681621107 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_001737_040 0.1736799467 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
14 Hb_000163_110 0.1744346571 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
15 Hb_001793_030 0.1764105232 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
16 Hb_002759_040 0.1781386419 - - BnaA09g29830D [Brassica napus]
17 Hb_005288_060 0.1784294266 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like isoform X1 [Citrus sinensis]
18 Hb_046117_030 0.1787929826 - - sialyltransferase, putative [Ricinus communis]
19 Hb_000313_230 0.1796888976 - - PREDICTED: uncharacterized protein LOC105636893 [Jatropha curcas]
20 Hb_000668_110 0.1799802186 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_062013_010 Hb_062013_010 Hb_000329_080 Hb_000329_080 Hb_062013_010--Hb_000329_080 Hb_001080_150 Hb_001080_150 Hb_062013_010--Hb_001080_150 Hb_000414_180 Hb_000414_180 Hb_062013_010--Hb_000414_180 Hb_000963_090 Hb_000963_090 Hb_062013_010--Hb_000963_090 Hb_001365_010 Hb_001365_010 Hb_062013_010--Hb_001365_010 Hb_182651_020 Hb_182651_020 Hb_062013_010--Hb_182651_020 Hb_000329_080--Hb_001365_010 Hb_000163_110 Hb_000163_110 Hb_000329_080--Hb_000163_110 Hb_001195_370 Hb_001195_370 Hb_000329_080--Hb_001195_370 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_001811_080 Hb_001811_080 Hb_000329_080--Hb_001811_080 Hb_000977_150 Hb_000977_150 Hb_000329_080--Hb_000977_150 Hb_001080_150--Hb_001195_370 Hb_001080_150--Hb_000329_080 Hb_007933_030 Hb_007933_030 Hb_001080_150--Hb_007933_030 Hb_001080_150--Hb_000963_090 Hb_078477_060 Hb_078477_060 Hb_001080_150--Hb_078477_060 Hb_005288_060 Hb_005288_060 Hb_000414_180--Hb_005288_060 Hb_001793_030 Hb_001793_030 Hb_000414_180--Hb_001793_030 Hb_000414_180--Hb_000329_080 Hb_000414_180--Hb_001080_150 Hb_000454_160 Hb_000454_160 Hb_000414_180--Hb_000454_160 Hb_010632_010 Hb_010632_010 Hb_000963_090--Hb_010632_010 Hb_000963_090--Hb_078477_060 Hb_000963_090--Hb_000329_080 Hb_002811_190 Hb_002811_190 Hb_000963_090--Hb_002811_190 Hb_000963_090--Hb_001811_080 Hb_001365_020 Hb_001365_020 Hb_001365_010--Hb_001365_020 Hb_001365_010--Hb_000163_110 Hb_000441_050 Hb_000441_050 Hb_001365_010--Hb_000441_050 Hb_003783_050 Hb_003783_050 Hb_001365_010--Hb_003783_050 Hb_035834_010 Hb_035834_010 Hb_001365_010--Hb_035834_010 Hb_006483_120 Hb_006483_120 Hb_182651_020--Hb_006483_120 Hb_000366_030 Hb_000366_030 Hb_182651_020--Hb_000366_030 Hb_182651_020--Hb_001080_150 Hb_182651_020--Hb_000329_080 Hb_182651_020--Hb_001195_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.355897 1.63955 2.23491 4.02836 0.638237 0.998768
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.285352 0.067351 0.465313 5.83674 12.1557

CAGE analysis