Hb_111868_010

Information

Type -
Description -
Location Contig111868: 2080-2424
Sequence    

Annotation

kegg
ID cic:CICLE_v10029524mg
description hypothetical protein
nr
ID XP_006423776.1
description hypothetical protein CICLE_v10029531mg [Citrus clementina]
swissprot
ID -
description -
trembl
ID M1DSR7
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400043383 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111868_010 0.0 - - hypothetical protein CICLE_v10029531mg [Citrus clementina]
2 Hb_000370_040 0.2137191542 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
3 Hb_001516_050 0.215779378 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
4 Hb_022213_030 0.2176126575 - - PREDICTED: uncharacterized protein LOC105114631 [Populus euphratica]
5 Hb_001538_020 0.2472360045 - - PREDICTED: uncharacterized protein LOC105629608 [Jatropha curcas]
6 Hb_019333_010 0.2533250581 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
7 Hb_010417_130 0.2544959831 - - PREDICTED: probable membrane-associated kinase regulator 2 [Jatropha curcas]
8 Hb_000417_020 0.2568336017 - - PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
9 Hb_129420_010 0.2595452188 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
10 Hb_001942_020 0.2604790859 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Jatropha curcas]
11 Hb_001269_520 0.2655078049 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
12 Hb_011994_070 0.2669201867 - - PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas]
13 Hb_004208_010 0.2703365407 - - PREDICTED: uncharacterized protein LOC105914588 [Setaria italica]
14 Hb_170193_020 0.2748178256 - - -
15 Hb_008317_020 0.2771646031 - - -
16 Hb_049293_010 0.2802207543 - - kinase, putative [Ricinus communis]
17 Hb_012165_020 0.2804695973 - - hypothetical protein POPTR_0007s05770g [Populus trichocarpa]
18 Hb_002320_090 0.2836476951 - - PREDICTED: endoglucanase 25-like [Jatropha curcas]
19 Hb_000270_710 0.2850211063 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
20 Hb_000251_050 0.2865734778 - - hypothetical protein JCGZ_21678 [Jatropha curcas]

Gene co-expression network

sample Hb_111868_010 Hb_111868_010 Hb_000370_040 Hb_000370_040 Hb_111868_010--Hb_000370_040 Hb_001516_050 Hb_001516_050 Hb_111868_010--Hb_001516_050 Hb_022213_030 Hb_022213_030 Hb_111868_010--Hb_022213_030 Hb_001538_020 Hb_001538_020 Hb_111868_010--Hb_001538_020 Hb_019333_010 Hb_019333_010 Hb_111868_010--Hb_019333_010 Hb_010417_130 Hb_010417_130 Hb_111868_010--Hb_010417_130 Hb_000370_040--Hb_022213_030 Hb_000270_830 Hb_000270_830 Hb_000370_040--Hb_000270_830 Hb_000836_060 Hb_000836_060 Hb_000370_040--Hb_000836_060 Hb_000370_040--Hb_001516_050 Hb_000370_040--Hb_010417_130 Hb_009674_050 Hb_009674_050 Hb_000370_040--Hb_009674_050 Hb_001516_050--Hb_022213_030 Hb_000599_230 Hb_000599_230 Hb_001516_050--Hb_000599_230 Hb_001266_120 Hb_001266_120 Hb_001516_050--Hb_001266_120 Hb_002320_090 Hb_002320_090 Hb_001516_050--Hb_002320_090 Hb_001080_150 Hb_001080_150 Hb_001516_050--Hb_001080_150 Hb_001942_020 Hb_001942_020 Hb_001516_050--Hb_001942_020 Hb_022213_030--Hb_001942_020 Hb_022213_030--Hb_001080_150 Hb_177343_010 Hb_177343_010 Hb_022213_030--Hb_177343_010 Hb_000270_710 Hb_000270_710 Hb_022213_030--Hb_000270_710 Hb_000417_020 Hb_000417_020 Hb_001538_020--Hb_000417_020 Hb_001269_520 Hb_001269_520 Hb_001538_020--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_001538_020--Hb_000251_050 Hb_002099_060 Hb_002099_060 Hb_001538_020--Hb_002099_060 Hb_000714_120 Hb_000714_120 Hb_001538_020--Hb_000714_120 Hb_002110_090 Hb_002110_090 Hb_001538_020--Hb_002110_090 Hb_000042_060 Hb_000042_060 Hb_019333_010--Hb_000042_060 Hb_000370_070 Hb_000370_070 Hb_019333_010--Hb_000370_070 Hb_000236_160 Hb_000236_160 Hb_019333_010--Hb_000236_160 Hb_019333_010--Hb_000417_020 Hb_019333_010--Hb_001538_020 Hb_019333_010--Hb_001269_520 Hb_011994_070 Hb_011994_070 Hb_010417_130--Hb_011994_070 Hb_001140_170 Hb_001140_170 Hb_010417_130--Hb_001140_170 Hb_010417_130--Hb_000270_830 Hb_010417_130--Hb_000042_060 Hb_105033_010 Hb_105033_010 Hb_010417_130--Hb_105033_010 Hb_010417_130--Hb_000270_710
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.37175 0.822553 0.454942 1.88296 0.451934 0.209411
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.70064 4.21957

CAGE analysis