Hb_005731_150

Information

Type -
Description -
Location Contig5731: 190311-192934
Sequence    

Annotation

kegg
ID rcu:RCOM_1447160
description hypothetical protein
nr
ID XP_012067555.1
description PREDICTED: uncharacterized protein LOC105630360 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26807 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49504: 191202-191486
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005731_150 0.0 - - PREDICTED: uncharacterized protein LOC105630360 [Jatropha curcas]
2 Hb_000054_110 0.211777582 - - PREDICTED: uncharacterized protein LOC105350810 [Fragaria vesca subsp. vesca]
3 Hb_005214_080 0.218429072 - - conserved hypothetical protein [Ricinus communis]
4 Hb_012753_010 0.237304732 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_000649_180 0.2465520487 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
6 Hb_003097_050 0.2481015581 - - hypothetical protein POPTR_0007s07150g [Populus trichocarpa]
7 Hb_001780_130 0.2511332777 - - hypothetical protein JCGZ_08545 [Jatropha curcas]
8 Hb_005511_090 0.2633544826 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 C isoform X1 [Jatropha curcas]
9 Hb_149515_010 0.2682512347 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
10 Hb_001096_020 0.2760880216 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Populus euphratica]
11 Hb_003349_100 0.2783971251 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001188_120 0.2800888611 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
13 Hb_161010_010 0.285643291 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
14 Hb_152868_030 0.2880602948 - - abhydrolase domain containing, putative [Ricinus communis]
15 Hb_021854_020 0.2906173888 - - hypothetical protein POPTR_1763s00200g, partial [Populus trichocarpa]
16 Hb_029904_010 0.2928525149 - - PREDICTED: uncharacterized protein LOC105635075 [Jatropha curcas]
17 Hb_000404_040 0.2929041222 - - conserved hypothetical protein [Ricinus communis]
18 Hb_126398_020 0.29346818 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002527_050 0.2934852166 - - hypothetical protein JCGZ_20265 [Jatropha curcas]
20 Hb_002943_010 0.2951496508 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]

Gene co-expression network

sample Hb_005731_150 Hb_005731_150 Hb_000054_110 Hb_000054_110 Hb_005731_150--Hb_000054_110 Hb_005214_080 Hb_005214_080 Hb_005731_150--Hb_005214_080 Hb_012753_010 Hb_012753_010 Hb_005731_150--Hb_012753_010 Hb_000649_180 Hb_000649_180 Hb_005731_150--Hb_000649_180 Hb_003097_050 Hb_003097_050 Hb_005731_150--Hb_003097_050 Hb_001780_130 Hb_001780_130 Hb_005731_150--Hb_001780_130 Hb_000054_110--Hb_012753_010 Hb_000054_110--Hb_003097_050 Hb_000054_110--Hb_005214_080 Hb_000054_110--Hb_001780_130 Hb_001096_020 Hb_001096_020 Hb_000054_110--Hb_001096_020 Hb_046998_010 Hb_046998_010 Hb_005214_080--Hb_046998_010 Hb_001141_040 Hb_001141_040 Hb_005214_080--Hb_001141_040 Hb_002888_060 Hb_002888_060 Hb_005214_080--Hb_002888_060 Hb_011853_010 Hb_011853_010 Hb_005214_080--Hb_011853_010 Hb_007951_070 Hb_007951_070 Hb_005214_080--Hb_007951_070 Hb_000445_030 Hb_000445_030 Hb_005214_080--Hb_000445_030 Hb_005511_090 Hb_005511_090 Hb_012753_010--Hb_005511_090 Hb_185058_020 Hb_185058_020 Hb_012753_010--Hb_185058_020 Hb_001188_120 Hb_001188_120 Hb_012753_010--Hb_001188_120 Hb_021854_020 Hb_021854_020 Hb_012753_010--Hb_021854_020 Hb_002291_020 Hb_002291_020 Hb_000649_180--Hb_002291_020 Hb_002527_050 Hb_002527_050 Hb_000649_180--Hb_002527_050 Hb_149515_010 Hb_149515_010 Hb_000649_180--Hb_149515_010 Hb_008033_060 Hb_008033_060 Hb_000649_180--Hb_008033_060 Hb_000453_130 Hb_000453_130 Hb_000649_180--Hb_000453_130 Hb_001754_260 Hb_001754_260 Hb_000649_180--Hb_001754_260 Hb_167977_010 Hb_167977_010 Hb_003097_050--Hb_167977_010 Hb_004505_030 Hb_004505_030 Hb_003097_050--Hb_004505_030 Hb_006736_010 Hb_006736_010 Hb_003097_050--Hb_006736_010 Hb_003349_100 Hb_003349_100 Hb_003097_050--Hb_003349_100 Hb_000141_010 Hb_000141_010 Hb_003097_050--Hb_000141_010 Hb_000473_030 Hb_000473_030 Hb_001780_130--Hb_000473_030 Hb_000330_150 Hb_000330_150 Hb_001780_130--Hb_000330_150 Hb_011360_060 Hb_011360_060 Hb_001780_130--Hb_011360_060 Hb_001780_130--Hb_011853_010 Hb_001780_130--Hb_046998_010 Hb_000173_260 Hb_000173_260 Hb_001780_130--Hb_000173_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0767602 0.067786 0.0293436 0.0499265 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0319134 0.118735 0.178978 0.132093

CAGE analysis