Hb_004984_080

Information

Type -
Description -
Location Contig4984: 93677-94797
Sequence    

Annotation

kegg
ID rcu:RCOM_1115620
description receptor protein kinase, putative (EC:2.7.10.2)
nr
ID XP_012080618.1
description PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
swissprot
ID A8R7E6
description Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1
trembl
ID A0A067LIP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16333 PE=4 SV=1
Gene Ontology
ID GO:0004672
description chitin elicitor receptor kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45601: 93685-93796
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004984_080 0.0 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
2 Hb_085187_010 0.1409970311 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
3 Hb_006816_230 0.1444806889 - - protein disulfide isomerase, putative [Ricinus communis]
4 Hb_007933_040 0.166920687 - - PREDICTED: probable beta-D-xylosidase 6 isoform X2 [Jatropha curcas]
5 Hb_001210_040 0.1670510069 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
6 Hb_000649_060 0.1673615641 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
7 Hb_002639_040 0.1700926024 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
8 Hb_002025_330 0.1710828489 - - peptide transporter, putative [Ricinus communis]
9 Hb_003159_050 0.1715208229 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1 [Jatropha curcas]
10 Hb_023988_030 0.1716127196 - - PREDICTED: transmembrane protein 19 [Vitis vinifera]
11 Hb_004586_160 0.1724068363 - - PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
12 Hb_025193_040 0.1734826569 - - PREDICTED: uncharacterized protein LOC105647286 [Jatropha curcas]
13 Hb_009615_060 0.1743459101 - - PREDICTED: prolyl endopeptidase-like [Jatropha curcas]
14 Hb_011537_060 0.1751199074 - - UPF0061 protein azo1574 [Morus notabilis]
15 Hb_002631_130 0.1764205317 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
16 Hb_003517_070 0.1771797233 - - PREDICTED: protein transport protein Sec24-like At3g07100 [Jatropha curcas]
17 Hb_000768_160 0.1774366486 - - PREDICTED: uncharacterized protein LOC105632531 [Jatropha curcas]
18 Hb_000330_150 0.1774404985 - - PREDICTED: dihydroflavonol-4-reductase-like [Jatropha curcas]
19 Hb_000941_150 0.1778597092 - - PREDICTED: uncharacterized protein LOC105637253 isoform X1 [Jatropha curcas]
20 Hb_027445_020 0.1780526096 - - PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein [Jatropha curcas]

Gene co-expression network

sample Hb_004984_080 Hb_004984_080 Hb_085187_010 Hb_085187_010 Hb_004984_080--Hb_085187_010 Hb_006816_230 Hb_006816_230 Hb_004984_080--Hb_006816_230 Hb_007933_040 Hb_007933_040 Hb_004984_080--Hb_007933_040 Hb_001210_040 Hb_001210_040 Hb_004984_080--Hb_001210_040 Hb_000649_060 Hb_000649_060 Hb_004984_080--Hb_000649_060 Hb_002639_040 Hb_002639_040 Hb_004984_080--Hb_002639_040 Hb_085187_010--Hb_001210_040 Hb_000244_260 Hb_000244_260 Hb_085187_010--Hb_000244_260 Hb_014497_060 Hb_014497_060 Hb_085187_010--Hb_014497_060 Hb_002026_070 Hb_002026_070 Hb_085187_010--Hb_002026_070 Hb_003490_050 Hb_003490_050 Hb_085187_010--Hb_003490_050 Hb_006816_230--Hb_000649_060 Hb_022092_010 Hb_022092_010 Hb_006816_230--Hb_022092_010 Hb_001587_030 Hb_001587_030 Hb_006816_230--Hb_001587_030 Hb_005846_050 Hb_005846_050 Hb_006816_230--Hb_005846_050 Hb_004096_110 Hb_004096_110 Hb_006816_230--Hb_004096_110 Hb_002284_100 Hb_002284_100 Hb_006816_230--Hb_002284_100 Hb_011537_060 Hb_011537_060 Hb_007933_040--Hb_011537_060 Hb_003159_050 Hb_003159_050 Hb_007933_040--Hb_003159_050 Hb_007741_120 Hb_007741_120 Hb_007933_040--Hb_007741_120 Hb_106890_010 Hb_106890_010 Hb_007933_040--Hb_106890_010 Hb_003340_010 Hb_003340_010 Hb_007933_040--Hb_003340_010 Hb_002686_200 Hb_002686_200 Hb_007933_040--Hb_002686_200 Hb_002400_060 Hb_002400_060 Hb_001210_040--Hb_002400_060 Hb_021297_020 Hb_021297_020 Hb_001210_040--Hb_021297_020 Hb_001210_040--Hb_003340_010 Hb_027445_020 Hb_027445_020 Hb_001210_040--Hb_027445_020 Hb_001801_020 Hb_001801_020 Hb_001210_040--Hb_001801_020 Hb_126976_010 Hb_126976_010 Hb_001210_040--Hb_126976_010 Hb_000649_060--Hb_001587_030 Hb_001226_130 Hb_001226_130 Hb_000649_060--Hb_001226_130 Hb_020805_180 Hb_020805_180 Hb_000649_060--Hb_020805_180 Hb_000890_070 Hb_000890_070 Hb_000649_060--Hb_000890_070 Hb_004450_070 Hb_004450_070 Hb_000649_060--Hb_004450_070 Hb_000152_700 Hb_000152_700 Hb_000649_060--Hb_000152_700 Hb_000103_290 Hb_000103_290 Hb_002639_040--Hb_000103_290 Hb_027506_010 Hb_027506_010 Hb_002639_040--Hb_027506_010 Hb_000363_290 Hb_000363_290 Hb_002639_040--Hb_000363_290 Hb_011819_020 Hb_011819_020 Hb_002639_040--Hb_011819_020 Hb_000406_210 Hb_000406_210 Hb_002639_040--Hb_000406_210 Hb_000409_050 Hb_000409_050 Hb_002639_040--Hb_000409_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.709472 0.797608 1.14696 2.1993 1.9928 0.360995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.318553 0.813904 1.23043 3.18262 3.59591

CAGE analysis