Hb_004800_030

Information

Type transcription factor
Description TF Family: OFP
Location Contig4800: 41422-42498
Sequence    

Annotation

kegg
ID pop:POPTR_0005s12670g
description hypothetical protein
nr
ID XP_012073993.1
description PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
swissprot
ID Q9ZU65
description Transcription repressor OFP7 OS=Arabidopsis thaliana GN=OFP7 PE=2 SV=1
trembl
ID A0A067KW40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09498 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004800_030 0.0 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
2 Hb_004117_240 0.1012414855 - - protease inhibitor/seed storage/ltp family [Cicer arietinum]
3 Hb_074660_010 0.1050525369 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
4 Hb_006788_130 0.1064589254 - - PREDICTED: histone H2A variant 1 [Jatropha curcas]
5 Hb_001061_010 0.1094895854 - - PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera]
6 Hb_000748_100 0.1123126879 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
7 Hb_169136_010 0.1123898326 - - conserved hypothetical protein [Ricinus communis]
8 Hb_011218_020 0.1130331908 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001564_100 0.113271343 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
10 Hb_000084_230 0.1180372538 - - hypothetical protein POPTR_0016s08030g [Populus trichocarpa]
11 Hb_002843_200 0.1184813716 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002837_120 0.119837835 - - PREDICTED: legumin A-like [Jatropha curcas]
13 Hb_006142_020 0.1206140872 - - JHL25P11.12 [Jatropha curcas]
14 Hb_006332_030 0.1229099977 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
15 Hb_002078_310 0.1233512876 - - PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
16 Hb_017959_020 0.1256730252 - - hypothetical protein POPTR_0011s03440g [Populus trichocarpa]
17 Hb_004449_160 0.1258663208 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_000157_060 0.1270067877 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
19 Hb_000155_280 0.1282356446 - - PREDICTED: GDSL esterase/lipase At5g45950 [Jatropha curcas]
20 Hb_064971_010 0.1291530897 - - hypothetical protein JCGZ_06105 [Jatropha curcas]

Gene co-expression network

sample Hb_004800_030 Hb_004800_030 Hb_004117_240 Hb_004117_240 Hb_004800_030--Hb_004117_240 Hb_074660_010 Hb_074660_010 Hb_004800_030--Hb_074660_010 Hb_006788_130 Hb_006788_130 Hb_004800_030--Hb_006788_130 Hb_001061_010 Hb_001061_010 Hb_004800_030--Hb_001061_010 Hb_000748_100 Hb_000748_100 Hb_004800_030--Hb_000748_100 Hb_169136_010 Hb_169136_010 Hb_004800_030--Hb_169136_010 Hb_000691_060 Hb_000691_060 Hb_004117_240--Hb_000691_060 Hb_000175_160 Hb_000175_160 Hb_004117_240--Hb_000175_160 Hb_011218_020 Hb_011218_020 Hb_004117_240--Hb_011218_020 Hb_000155_280 Hb_000155_280 Hb_004117_240--Hb_000155_280 Hb_017959_020 Hb_017959_020 Hb_004117_240--Hb_017959_020 Hb_004117_070 Hb_004117_070 Hb_004117_240--Hb_004117_070 Hb_000527_030 Hb_000527_030 Hb_074660_010--Hb_000527_030 Hb_001153_230 Hb_001153_230 Hb_074660_010--Hb_001153_230 Hb_001564_100 Hb_001564_100 Hb_074660_010--Hb_001564_100 Hb_000157_060 Hb_000157_060 Hb_074660_010--Hb_000157_060 Hb_004007_080 Hb_004007_080 Hb_074660_010--Hb_004007_080 Hb_002837_120 Hb_002837_120 Hb_074660_010--Hb_002837_120 Hb_000084_230 Hb_000084_230 Hb_006788_130--Hb_000084_230 Hb_006788_130--Hb_001564_100 Hb_001235_040 Hb_001235_040 Hb_006788_130--Hb_001235_040 Hb_001220_020 Hb_001220_020 Hb_006788_130--Hb_001220_020 Hb_004174_030 Hb_004174_030 Hb_006788_130--Hb_004174_030 Hb_003018_210 Hb_003018_210 Hb_006788_130--Hb_003018_210 Hb_001519_080 Hb_001519_080 Hb_001061_010--Hb_001519_080 Hb_008642_020 Hb_008642_020 Hb_001061_010--Hb_008642_020 Hb_001952_100 Hb_001952_100 Hb_001061_010--Hb_001952_100 Hb_007558_060 Hb_007558_060 Hb_001061_010--Hb_007558_060 Hb_000005_390 Hb_000005_390 Hb_001061_010--Hb_000005_390 Hb_001061_010--Hb_011218_020 Hb_001279_050 Hb_001279_050 Hb_000748_100--Hb_001279_050 Hb_002473_030 Hb_002473_030 Hb_000748_100--Hb_002473_030 Hb_005649_050 Hb_005649_050 Hb_000748_100--Hb_005649_050 Hb_001454_180 Hb_001454_180 Hb_000748_100--Hb_001454_180 Hb_004963_020 Hb_004963_020 Hb_000748_100--Hb_004963_020 Hb_006142_020 Hb_006142_020 Hb_169136_010--Hb_006142_020 Hb_032011_020 Hb_032011_020 Hb_169136_010--Hb_032011_020 Hb_169136_010--Hb_002837_120 Hb_023558_010 Hb_023558_010 Hb_169136_010--Hb_023558_010 Hb_007975_070 Hb_007975_070 Hb_169136_010--Hb_007975_070 Hb_105767_030 Hb_105767_030 Hb_169136_010--Hb_105767_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0808579 0.350399 17.6486 3.29886 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.134516 0.043805 0.149568

CAGE analysis