Hb_004586_160

Information

Type -
Description -
Location Contig4586: 185506-191864
Sequence    

Annotation

kegg
ID rcu:RCOM_1039110
description glucose-6-phosphate isomerase, putative (EC:5.3.1.9)
nr
ID XP_012067970.1
description PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
swissprot
ID Q8H103
description Glucose-6-phosphate isomerase 1, chloroplastic OS=Arabidopsis thaliana GN=PGI1 PE=1 SV=1
trembl
ID A0A067KZ28
description Glucose-6-phosphate isomerase OS=Jatropha curcas GN=JCGZ_15868 PE=3 SV=1
Gene Ontology
ID GO:0005829
description glucose-6-phosphate isomerase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43531: 186342-186460 , PASA_asmbl_43532: 186673-191527
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004586_160 0.0 - - PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
2 Hb_000890_080 0.1143853297 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Populus euphratica]
3 Hb_002631_130 0.1255582732 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
4 Hb_009615_060 0.129476954 - - PREDICTED: prolyl endopeptidase-like [Jatropha curcas]
5 Hb_000548_070 0.1357640125 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
6 Hb_005588_100 0.1367748392 - - protein phosphatase, putative [Ricinus communis]
7 Hb_003044_080 0.1422783375 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
8 Hb_001728_140 0.1431454781 - - -
9 Hb_139848_010 0.1453875956 - - PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic [Populus euphratica]
10 Hb_000181_460 0.1462422154 - - cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative [Ricinus communis]
11 Hb_003159_050 0.1468268134 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_001623_190 0.1473279622 - - PREDICTED: uncharacterized protein LOC105638473 [Jatropha curcas]
13 Hb_007933_040 0.1525118848 - - PREDICTED: probable beta-D-xylosidase 6 isoform X2 [Jatropha curcas]
14 Hb_002876_270 0.1533805838 - - PREDICTED: probable magnesium transporter NIPA4 isoform X1 [Jatropha curcas]
15 Hb_001564_070 0.1540078154 - - PREDICTED: G patch domain-containing protein TGH [Jatropha curcas]
16 Hb_014497_060 0.1547164023 - - phosphofructokinase, putative [Ricinus communis]
17 Hb_022092_010 0.1578453481 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
18 Hb_002232_160 0.1593369611 - - Transaminase mtnE, putative [Ricinus communis]
19 Hb_001689_040 0.1598812577 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 1-like [Jatropha curcas]
20 Hb_097495_010 0.1601086746 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_004586_160 Hb_004586_160 Hb_000890_080 Hb_000890_080 Hb_004586_160--Hb_000890_080 Hb_002631_130 Hb_002631_130 Hb_004586_160--Hb_002631_130 Hb_009615_060 Hb_009615_060 Hb_004586_160--Hb_009615_060 Hb_000548_070 Hb_000548_070 Hb_004586_160--Hb_000548_070 Hb_005588_100 Hb_005588_100 Hb_004586_160--Hb_005588_100 Hb_003044_080 Hb_003044_080 Hb_004586_160--Hb_003044_080 Hb_003440_020 Hb_003440_020 Hb_000890_080--Hb_003440_020 Hb_004348_040 Hb_004348_040 Hb_000890_080--Hb_004348_040 Hb_002232_160 Hb_002232_160 Hb_000890_080--Hb_002232_160 Hb_000070_110 Hb_000070_110 Hb_000890_080--Hb_000070_110 Hb_002529_090 Hb_002529_090 Hb_000890_080--Hb_002529_090 Hb_007416_110 Hb_007416_110 Hb_000890_080--Hb_007416_110 Hb_002631_130--Hb_009615_060 Hb_000197_190 Hb_000197_190 Hb_002631_130--Hb_000197_190 Hb_000494_030 Hb_000494_030 Hb_002631_130--Hb_000494_030 Hb_000768_160 Hb_000768_160 Hb_002631_130--Hb_000768_160 Hb_000683_050 Hb_000683_050 Hb_002631_130--Hb_000683_050 Hb_002631_130--Hb_000548_070 Hb_001493_150 Hb_001493_150 Hb_009615_060--Hb_001493_150 Hb_009615_060--Hb_000548_070 Hb_001728_140 Hb_001728_140 Hb_009615_060--Hb_001728_140 Hb_003159_050 Hb_003159_050 Hb_009615_060--Hb_003159_050 Hb_012393_030 Hb_012393_030 Hb_009615_060--Hb_012393_030 Hb_000548_070--Hb_001728_140 Hb_000548_070--Hb_003044_080 Hb_001510_020 Hb_001510_020 Hb_000548_070--Hb_001510_020 Hb_000800_090 Hb_000800_090 Hb_000548_070--Hb_000800_090 Hb_000251_030 Hb_000251_030 Hb_000548_070--Hb_000251_030 Hb_007943_150 Hb_007943_150 Hb_005588_100--Hb_007943_150 Hb_000496_130 Hb_000496_130 Hb_005588_100--Hb_000496_130 Hb_001564_070 Hb_001564_070 Hb_005588_100--Hb_001564_070 Hb_002811_200 Hb_002811_200 Hb_005588_100--Hb_002811_200 Hb_001434_020 Hb_001434_020 Hb_005588_100--Hb_001434_020 Hb_000230_530 Hb_000230_530 Hb_005588_100--Hb_000230_530 Hb_003044_080--Hb_000800_090 Hb_003044_080--Hb_009615_060 Hb_003044_080--Hb_001728_140 Hb_003044_080--Hb_002631_130 Hb_000950_010 Hb_000950_010 Hb_003044_080--Hb_000950_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.45481 2.33219 9.58794 10.6108 3.1562 2.05449
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.88343 3.13465 9.71834 17.2991 18.0576

CAGE analysis