Hb_000950_010

Information

Type -
Description -
Location Contig950: 27250-33433
Sequence    

Annotation

kegg
ID cit:102629058
description S-formylglutathione hydrolase-like
nr
ID XP_012086220.1
description PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
swissprot
ID Q8LAS8
description S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2
trembl
ID A0A067K1G1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21123 PE=4 SV=1
Gene Ontology
ID GO:0048046
description s-formylglutathione hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63392: 27388-30376
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000950_010 0.0 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
2 Hb_006277_010 0.101055861 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Gossypium raimondii]
3 Hb_002908_060 0.1097887495 - - unnamed protein product, partial [Coffea canephora]
4 Hb_003044_080 0.1124137366 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
5 Hb_000976_100 0.1195611236 - - eukaryotic translation elongation factor, putative [Ricinus communis]
6 Hb_004046_030 0.1240614721 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
7 Hb_000327_160 0.132545925 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
8 Hb_007416_210 0.1328954758 - - PREDICTED: coatomer subunit beta-1 [Jatropha curcas]
9 Hb_003206_110 0.1332551193 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
10 Hb_008176_010 0.133808259 - - PREDICTED: pentatricopeptide repeat-containing protein At4g20090 [Jatropha curcas]
11 Hb_002748_020 0.1343939959 - - transducin family protein [Populus trichocarpa]
12 Hb_000800_090 0.1345996121 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
13 Hb_000941_150 0.1352924704 - - PREDICTED: uncharacterized protein LOC105637253 isoform X1 [Jatropha curcas]
14 Hb_000019_200 0.1354813785 - - PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X3 [Jatropha curcas]
15 Hb_012678_020 0.1364506687 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
16 Hb_000363_040 0.1368218709 - - Protein transport protein Sec24A, putative [Ricinus communis]
17 Hb_003517_070 0.1378851742 - - PREDICTED: protein transport protein Sec24-like At3g07100 [Jatropha curcas]
18 Hb_001673_100 0.1380015692 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Jatropha curcas]
19 Hb_000946_110 0.1389814723 - - GTP cyclohydrolase I, putative [Ricinus communis]
20 Hb_009615_060 0.1397527441 - - PREDICTED: prolyl endopeptidase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000950_010 Hb_000950_010 Hb_006277_010 Hb_006277_010 Hb_000950_010--Hb_006277_010 Hb_002908_060 Hb_002908_060 Hb_000950_010--Hb_002908_060 Hb_003044_080 Hb_003044_080 Hb_000950_010--Hb_003044_080 Hb_000976_100 Hb_000976_100 Hb_000950_010--Hb_000976_100 Hb_004046_030 Hb_004046_030 Hb_000950_010--Hb_004046_030 Hb_000327_160 Hb_000327_160 Hb_000950_010--Hb_000327_160 Hb_006277_010--Hb_004046_030 Hb_003206_110 Hb_003206_110 Hb_006277_010--Hb_003206_110 Hb_170138_010 Hb_170138_010 Hb_006277_010--Hb_170138_010 Hb_000185_220 Hb_000185_220 Hb_006277_010--Hb_000185_220 Hb_005601_040 Hb_005601_040 Hb_006277_010--Hb_005601_040 Hb_000053_060 Hb_000053_060 Hb_002908_060--Hb_000053_060 Hb_001673_100 Hb_001673_100 Hb_002908_060--Hb_001673_100 Hb_004870_040 Hb_004870_040 Hb_002908_060--Hb_004870_040 Hb_007383_020 Hb_007383_020 Hb_002908_060--Hb_007383_020 Hb_003098_080 Hb_003098_080 Hb_002908_060--Hb_003098_080 Hb_000548_070 Hb_000548_070 Hb_003044_080--Hb_000548_070 Hb_000800_090 Hb_000800_090 Hb_003044_080--Hb_000800_090 Hb_009615_060 Hb_009615_060 Hb_003044_080--Hb_009615_060 Hb_001728_140 Hb_001728_140 Hb_003044_080--Hb_001728_140 Hb_002631_130 Hb_002631_130 Hb_003044_080--Hb_002631_130 Hb_000237_040 Hb_000237_040 Hb_000976_100--Hb_000237_040 Hb_027445_020 Hb_027445_020 Hb_000976_100--Hb_027445_020 Hb_001369_360 Hb_001369_360 Hb_000976_100--Hb_001369_360 Hb_002025_330 Hb_002025_330 Hb_000976_100--Hb_002025_330 Hb_000363_040 Hb_000363_040 Hb_000976_100--Hb_000363_040 Hb_004019_120 Hb_004019_120 Hb_000976_100--Hb_004019_120 Hb_004046_030--Hb_003206_110 Hb_004046_030--Hb_170138_010 Hb_004046_030--Hb_000185_220 Hb_004046_030--Hb_000800_090 Hb_012678_020 Hb_012678_020 Hb_004046_030--Hb_012678_020 Hb_002748_020 Hb_002748_020 Hb_000327_160--Hb_002748_020 Hb_000203_260 Hb_000203_260 Hb_000327_160--Hb_000203_260 Hb_000094_210 Hb_000094_210 Hb_000327_160--Hb_000094_210 Hb_000366_200 Hb_000366_200 Hb_000327_160--Hb_000366_200 Hb_003994_150 Hb_003994_150 Hb_000327_160--Hb_003994_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.0314 16.4093 17.5511 69.8908 18.9028 26.0055
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.7177 16.774 60.244 74.9542 72.6276

CAGE analysis