Hb_000094_210

Information

Type -
Description -
Location Contig94: 176978-187799
Sequence    

Annotation

kegg
ID rcu:RCOM_1594100
description glucose-6-phosphate isomerase, putative (EC:5.3.1.9)
nr
ID XP_002510371.1
description glucose-6-phosphate isomerase, putative [Ricinus communis]
swissprot
ID P54243
description Glucose-6-phosphate isomerase, cytosolic OS=Oenothera mexicana GN=PGIC PE=3 SV=1
trembl
ID B9R7S8
description Glucose-6-phosphate isomerase OS=Ricinus communis GN=RCOM_1594100 PE=3 SV=1
Gene Ontology
ID GO:0005829
description glucose-6-phosphate isomerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63106: 177136-188171 , PASA_asmbl_63107: 177041-188315
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000094_210 0.0 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
2 Hb_000069_210 0.0801341508 - - PREDICTED: exportin-2 [Jatropha curcas]
3 Hb_002631_010 0.0803250369 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
4 Hb_007416_090 0.0816319619 - - UDP-sugar transporter, putative [Ricinus communis]
5 Hb_001085_240 0.0849400317 - - PREDICTED: probable calcium-binding protein CML22 isoform X1 [Jatropha curcas]
6 Hb_003633_050 0.0866054163 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
7 Hb_000025_190 0.0884142989 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
8 Hb_000095_080 0.0961533688 - - PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Jatropha curcas]
9 Hb_002150_040 0.1000971603 - - PREDICTED: CMP-sialic acid transporter 1 isoform X3 [Jatropha curcas]
10 Hb_001104_100 0.1014697809 - - RecName: Full=Enolase 2; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Allergen=Hev b 9 [Hevea brasiliensis]
11 Hb_007383_020 0.1017409429 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000115_150 0.1018764623 - - PREDICTED: IST1 homolog [Jatropha curcas]
13 Hb_002042_020 0.1073090465 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
14 Hb_000096_160 0.1074912561 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 2 [Jatropha curcas]
15 Hb_007460_020 0.1084682559 - - PREDICTED: guanosine nucleotide diphosphate dissociation inhibitor 1 [Jatropha curcas]
16 Hb_000072_130 0.1098805119 - - hypothetical protein OsJ_28567 [Oryza sativa Japonica Group]
17 Hb_000228_110 0.1100271754 - - unnamed protein product [Vitis vinifera]
18 Hb_003994_150 0.1103122185 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
19 Hb_008245_010 0.1103587165 - - PREDICTED: protein NEDD1 [Jatropha curcas]
20 Hb_000212_450 0.1107813052 - - PREDICTED: basic leucine zipper and W2 domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000094_210 Hb_000094_210 Hb_000069_210 Hb_000069_210 Hb_000094_210--Hb_000069_210 Hb_002631_010 Hb_002631_010 Hb_000094_210--Hb_002631_010 Hb_007416_090 Hb_007416_090 Hb_000094_210--Hb_007416_090 Hb_001085_240 Hb_001085_240 Hb_000094_210--Hb_001085_240 Hb_003633_050 Hb_003633_050 Hb_000094_210--Hb_003633_050 Hb_000025_190 Hb_000025_190 Hb_000094_210--Hb_000025_190 Hb_001876_010 Hb_001876_010 Hb_000069_210--Hb_001876_010 Hb_000069_210--Hb_007416_090 Hb_000095_080 Hb_000095_080 Hb_000069_210--Hb_000095_080 Hb_001789_150 Hb_001789_150 Hb_000069_210--Hb_001789_150 Hb_001936_130 Hb_001936_130 Hb_000069_210--Hb_001936_130 Hb_008245_010 Hb_008245_010 Hb_002631_010--Hb_008245_010 Hb_010560_050 Hb_010560_050 Hb_002631_010--Hb_010560_050 Hb_000700_040 Hb_000700_040 Hb_002631_010--Hb_000700_040 Hb_002631_010--Hb_000025_190 Hb_017131_010 Hb_017131_010 Hb_002631_010--Hb_017131_010 Hb_001898_080 Hb_001898_080 Hb_007416_090--Hb_001898_080 Hb_000116_270 Hb_000116_270 Hb_007416_090--Hb_000116_270 Hb_007416_090--Hb_001789_150 Hb_149985_010 Hb_149985_010 Hb_007416_090--Hb_149985_010 Hb_007416_090--Hb_000095_080 Hb_001085_240--Hb_003633_050 Hb_000096_160 Hb_000096_160 Hb_001085_240--Hb_000096_160 Hb_000228_110 Hb_000228_110 Hb_001085_240--Hb_000228_110 Hb_002675_140 Hb_002675_140 Hb_001085_240--Hb_002675_140 Hb_005914_170 Hb_005914_170 Hb_001085_240--Hb_005914_170 Hb_003633_050--Hb_000096_160 Hb_003633_050--Hb_005914_170 Hb_011344_190 Hb_011344_190 Hb_003633_050--Hb_011344_190 Hb_003376_250 Hb_003376_250 Hb_003633_050--Hb_003376_250 Hb_019654_030 Hb_019654_030 Hb_003633_050--Hb_019654_030 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_002660_170 Hb_002660_170 Hb_000025_190--Hb_002660_170 Hb_004880_150 Hb_004880_150 Hb_000025_190--Hb_004880_150 Hb_005648_010 Hb_005648_010 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.5849 10.1987 10.8759 38.4116 12.7391 16.4602
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.0433 15.1384 29.2494 37.0507 21.2296

CAGE analysis